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SCNpilot_cont_300_bf_scaffold_84_curated_85

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 83771..84937

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2TFK1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 388.0
  • Bit_score: 736
  • Evalue 1.60e-209
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL77147.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 388.0
  • Bit_score: 736
  • Evalue 2.30e-209
putative ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 388.0
  • Bit_score: 687
  • Evalue 2.80e-195

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGAAAGTCATGAACCGAATTCGCACACTCGCGGCCGTGGCCGTGGGACTCGGCGCGCTGAGCGCCGCGAGCGCCTGGGCCGCCGATCTCAAGGTCGGTTTCATCACTTCGCTGTCGGGGCCGGTGTCGTCGCTGGGCATTCCCTACGACAAGGGCATGAAGGCGGCGGTGGCCTACAAGTCGGAGGTGGGCGGCCGCAAGGTGCAGGTGATCCAGCTCGACGATGCGTCCGACCCGTCCACGGCCGCGCGCAACGCACGCAAGCTGATCGAGGAAGACAAGGTCGACGTCATCATCGGCACGGCCGGCGCGCCGGGCTCGCTGGCGATTGCCGGCGTGGCGCGCGAGACCAAGACGCCGCTGATCTCCATCGCCAACGCCGACCTGGCCGGCGAGGAGGGCGCATGGATGGTGACGCTGCCGCAGCCCGCGCCGCTGATGATGGGCGCGATGGTCGAGAAGATGAAGCAGGCCGGCGTGAAGACGGTGGCCTACATCGGCTACTCCGACGCCTGGGGCGACCTGGTGTACGACGCGCTCATGAAGTCGGCGCCCGCCGCCGGCATCAAGGTGGTGAGCAACGAGCGCTATGCGCGCAGCGATTCGTCGGTGGCCGGCCAGGTGCTGAAGATCGTGGCGCTGCGGCCCGACGCGGTGATCACCGGCGCCTCGGGCACGCCCGGCGCGCTGCCCTACCTGGCGCTGGCAGAGCGCGGCTACAAGGGAAAGATCTACGGCATGCATTCGCTGATCAACCCCGACTTCATCCGCGTCGGTGGCCCCTCGGTCGAAGGCCTGCTGGCGCCCACCGGCCCGGTGGTGGTGGCCGAGCAGTTGCCCGACAGCAACCCGATGAAGAAGATCGCGATGGACTTCCGCACCGCCTACCAGAAGGCCAACGGCGCGCCGCCCACGGACACCTTCTCGGCCTACAGCTTCGATGCATGGCTGATCTACCTCGACGCCGCGCAGCGCGCGCTGGCCAGCAAGGCCGAGCCGGGCACGCCGCAGTTCCGCCTTGCCCTGCGCGATGCCATCGTCAGCACCAAGGAGCTGGTGGGCACGCACAGCGTCTACAACTTCAAGCCGACCGACCGCTACGGCTCGGACGACCGCTCGCGCGTCGTCGTGAAGCTGGAAAAGGGTCAATGGAAGCTGGTGCCCTGA
PROTEIN sequence
Length: 389
MKVMNRIRTLAAVAVGLGALSAASAWAADLKVGFITSLSGPVSSLGIPYDKGMKAAVAYKSEVGGRKVQVIQLDDASDPSTAARNARKLIEEDKVDVIIGTAGAPGSLAIAGVARETKTPLISIANADLAGEEGAWMVTLPQPAPLMMGAMVEKMKQAGVKTVAYIGYSDAWGDLVYDALMKSAPAAGIKVVSNERYARSDSSVAGQVLKIVALRPDAVITGASGTPGALPYLALAERGYKGKIYGMHSLINPDFIRVGGPSVEGLLAPTGPVVVAEQLPDSNPMKKIAMDFRTAYQKANGAPPTDTFSAYSFDAWLIYLDAAQRALASKAEPGTPQFRLALRDAIVSTKELVGTHSVYNFKPTDRYGSDDRSRVVVKLEKGQWKLVP*