ggKbase home page

SCNpilot_cont_300_bf_scaffold_84_curated_139

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(146431..147246)

Top 3 Functional Annotations

Value Algorithm Source
Cobalt-zinc-cadmium resistance protein CzcD (Cation efflux system protein czcD) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5H6_HERAR similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 272.0
  • Bit_score: 373
  • Evalue 1.50e-100
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36826.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 272.0
  • Bit_score: 384
  • Evalue 1.20e-103
czcD; cobalt-zinc-cadmium resistance protein czcD; K03295 cation efflux system protein, CDF family similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 272.0
  • Bit_score: 373
  • Evalue 4.70e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGGTCGCGGAGGTGATCGGAGGACTCGTCACCGGAAGCCTTGCGCTGATTTCCGACGCGGCGCATATGTTCACAGACACAGCGGCGCTGGCTATTTCGCTTGCAGCGATCCAGATCGGTAAGCGCGCAGTAGACGCCAAGCGAACTTTCGGCTACTACCGATTCGAGATCCTCGCGGCCGCGTTTAATGCTCTCCTGCTCTTCGGTGTTGCCATCTACATCCTCTATGAAGCCTGGCAACGGATGCGCTCGCCGCAAACGGTCGACTCCATCCCGATGCTGATCATTGCAGCGTTGGGTCTTGTCGTGAACCTCGTGAGCATGAGATTGCTCTCGTCGGGAAAGGACCGGAGCCTCAATGTCAAGGGCGCCTACCTGGAAGTCTGGAGCGACATGCTCGGGTCGATGGGAGTAATTGCAGGGGCCGTCGTGATCTGGTTTACAGGCTGGACCTGGGTCGATTCCGTGATCGCCGTCGCGATTGGATTCTGGGTGTTGCCGCGGACTTGGCTGCTGTTGCGAGACAGCATGAATATTCTTCTCGAGGGTGCGCCGGACGATGTCGATGTTGCAGAGATCGAAAAAGCTCTGCGCGAATTGCCGAGTGTGGATTCCATTCACGAGCTGCACGTCTGGGCTATCTCCAGCGGCAAGGTGAGCTTGAGCGTTCATCTAGTCAGCGGAAGCGGTGACTTAGACAGTCTCGTGGCGGAGGGATCCCGCATCCTTGCGGAGCGCTTTGACATTCACCACTCGACGATCCAACCTGAACGCGTTCCATGCGGTCAGGCGTCGGAAACACATCGGTTCGAGTGA
PROTEIN sequence
Length: 272
MVAEVIGGLVTGSLALISDAAHMFTDTAALAISLAAIQIGKRAVDAKRTFGYYRFEILAAAFNALLLFGVAIYILYEAWQRMRSPQTVDSIPMLIIAALGLVVNLVSMRLLSSGKDRSLNVKGAYLEVWSDMLGSMGVIAGAVVIWFTGWTWVDSVIAVAIGFWVLPRTWLLLRDSMNILLEGAPDDVDVAEIEKALRELPSVDSIHELHVWAISSGKVSLSVHLVSGSGDLDSLVAEGSRILAERFDIHHSTIQPERVPCGQASETHRFE*