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SCNpilot_cont_300_bf_scaffold_112_curated_6

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6070..7113

Top 3 Functional Annotations

Value Algorithm Source
LysR-family transcriptional regulator n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UE73_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 308.0
  • Bit_score: 300
  • Evalue 2.70e-78
LysR-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 308.0
  • Bit_score: 300
  • Evalue 8.50e-79
LysR-family transcriptional regulator {ECO:0000313|EMBL:AGH84718.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 308.0
  • Bit_score: 300
  • Evalue 3.80e-78

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
GTGGAAACGATAGACAAGTCCCTGGACGCGGCCTTCGACCTGAACCTGCTGCGTGTGGTGGTGACGCTGGGCAACACCCGCAGCGTCACGCATGCAGCGGCCGCGCTCGGCATGAGCCAGTCCGGCTTCAGCAGCGCGCTCGCGCGATTGCGGCAGCTGTGCGGCGACCCGCTGTTCGTGCGCACGGCCAGCGGCATGTCTCCCACGCCGCGCGCCGAGCGCATGGTGGCCACGGCCCGGTCGGTGCTCGCGCAGGTGGCCGAGGGCGTGCTCGGGCAGCCCGAGTTCGATGCCGCCACCACGCGCACCGAGTTCCGCCTGGCCATGGCGGACGTCGCCGAGATCGTGTTCCTGCCTCGCTTGCTGCGCCATTTCCAGGTGCATGCGCCGCACGCGCGCGTGGTCTGCGTCACGCTGCCGAACGGCCCGCTGCAGCAGGCGATGGCATCGGGCGAGATAGACCTCGCGCTGGGCTACTTTCCGGACCTGAACGCACAGTCGTTCTTCAGGCAGCGGCTCTATGTCCACACGTATGCGTGCATGGTGCGCAAGGGTCACCCGCTGGAGGGCAGCCGGCTCACACAGAAGGCGTACCTGAACCATGGGCACGCGGACGTCGCGTCGCCGGCGCGCAGCAACGAATTCTTCGACAAGTTCCTGACGCGTCGCGGCCTGCAACGGCGCATCGTCCTGAGCACGCAGCACCACATGAGCCTGCCGGCCATCATCGAGGCGACGGACCTGCTGGCCACGGTGCCGTTGGCAACGGGCGCGCGCTTCGCCCAGCTCGGCGCCGTGCAGTTGCTCGGGCTCCCGTTCCAGCCGCCGACCTTCGCGGTGCAGGCGCATTGGCACCGCCTCGTGCACCACGACGCACGCAACCGGTGGCTGCGCAGCCAGTGCTCCGATCTGTTCAACGACGCCACGGACGAGTGGCGCGACATCGAGACGGCGCTCTACGGTGCGGCGCTGCGCGCCCGGCGCACGCAGGCGCCCAAGGCGAAGGCGAAGACGGACCGCCGGGCGCAGAAGCAGCCAAGCTAG
PROTEIN sequence
Length: 348
VETIDKSLDAAFDLNLLRVVVTLGNTRSVTHAAAALGMSQSGFSSALARLRQLCGDPLFVRTASGMSPTPRAERMVATARSVLAQVAEGVLGQPEFDAATTRTEFRLAMADVAEIVFLPRLLRHFQVHAPHARVVCVTLPNGPLQQAMASGEIDLALGYFPDLNAQSFFRQRLYVHTYACMVRKGHPLEGSRLTQKAYLNHGHADVASPARSNEFFDKFLTRRGLQRRIVLSTQHHMSLPAIIEATDLLATVPLATGARFAQLGAVQLLGLPFQPPTFAVQAHWHRLVHHDARNRWLRSQCSDLFNDATDEWRDIETALYGAALRARRTQAPKAKAKTDRRAQKQPS*