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SCNpilot_cont_300_bf_scaffold_112_curated_28

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(32815..33369)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369B24B similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 175.0
  • Bit_score: 287
  • Evalue 9.60e-75
Variovorax paradoxus strain MEDvA23 contig_65, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25746.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 161.0
  • Bit_score: 143
  • Evalue 2.40e-31
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 166.0
  • Bit_score: 140
  • Evalue 4.60e-31

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGGACTCGCTCAACACACCGACGACCACCGCCATCACCGCCGGTTTCCTGGACTCGCTGGCCGAGGCTCCGGACGCCGGCGAGGCGCTACGCCGGATCGACGGACGCCGCTTGCTGATGGCCCCGGGCAGCATCTTCAGCATCCAGCAGAACGTGACGACCGGGCGCGATGCGGCCGGCCAGGTCCTGCTTCGCCGCTTCTATTCGTCGGAGGCCTCGACCTTCCCCGTGAACGGTGCCAAGCGCAAGACGCTGACGCGCTGGACCGAGTGCCTCTTCGTGCAGGGGCGCGTGTTCGTCGGCGAAGGCGAGCAACTGCTTGCGCGGACCTTCGACGATTTCGAGCAGATGCGCGCCTACGCGCTGCGCAGCGTGATCAACGTGCCGCTGATGCAGGGCGGACTGTGCTACGCCACCTTCAACGTCTTCGGAACCCGCGCCCGCTGGCAGCCGGAGGAAGTTCTCGGCATCCGGTTGCTGGCGCTTGCCGCCGCGCGCTGGGTGCCCTCCGCGCCCGGACTCGCCTACAGCTTCGAGGGAACACCATGCCTGTGA
PROTEIN sequence
Length: 185
MDSLNTPTTTAITAGFLDSLAEAPDAGEALRRIDGRRLLMAPGSIFSIQQNVTTGRDAAGQVLLRRFYSSEASTFPVNGAKRKTLTRWTECLFVQGRVFVGEGEQLLARTFDDFEQMRAYALRSVINVPLMQGGLCYATFNVFGTRARWQPEEVLGIRLLALAAARWVPSAPGLAYSFEGTPCL*