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SCNpilot_cont_300_bf_scaffold_329_curated_10

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(12057..12767)

Top 3 Functional Annotations

Value Algorithm Source
Putative branched-chain amino acid permease, AzlC family n=1 Tax=Variovorax paradoxus B4 RepID=T1XEN6_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 234.0
  • Bit_score: 422
  • Evalue 3.20e-115
putative branched-chain amino acid permease, AzlC family similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 234.0
  • Bit_score: 422
  • Evalue 1.00e-115
Putative branched-chain amino acid permease, AzlC family {ECO:0000313|EMBL:AGU50794.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 234.0
  • Bit_score: 422
  • Evalue 4.50e-115

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGCCGACCCCGAGTGGCGCGGCGCCTTTGCCGAGGGCCGGCGCGACATCGCCGGCGCCGCGCTCGGCACCATGGCCATGGGCCTGGTGGCGGGCGTGGCCATGGCCAAGAGTGGTGTGGGGCTGGGGGCGATCCTGGCCATGTCGCTGCTGGTGTTCGCGAGCGCGTCGCAGCTGGCTTGCCTGCCGCTCATCGCGGCCGGCGCGCCGCTGTGGGTGATCGTCGCGACGGCGTGCGTGCTCAACCTGCGCTTCGTGGTGTTCAGCGTGAGCTGGCGCCGCTACTTCGGCGGGCATCGCAGGACGCAGCGCGTGCTGTTGTCGTACCTTGCGGGTGACCCGGTGTATGCGCAGTTCGTGCTGCGGCATCCGGAGCCCGCGCCTTCGGGGTGCGCGACGACGCGGCAGCAGGGCTACTTTCTAGGGCTCGCGCTGACCAACTGGGCGGCGTGGCATGTGGCTTCGCTCGCGGGCATCTTCCTGGCCGACGCCATTCCCGCTGCATGGGGCCTGCGCTTCATCGGCGTGCTGGCGCTACTCGCGCTCGCGTTGCCGATGCTCACCGACCGCGCGGTGCGCTGCTCCGCGCTGGCGGCGGGCATGGTGGCGCTGGCCACGGCCTCGTGGCCGATGGGGCTGAACGTGGTTGCAGCCATCGCCACGGCCTTCGCGGCCGGCACCTGGGCCGACCGCCGGTGGGGTGCGCGCTGA
PROTEIN sequence
Length: 237
MADPEWRGAFAEGRRDIAGAALGTMAMGLVAGVAMAKSGVGLGAILAMSLLVFASASQLACLPLIAAGAPLWVIVATACVLNLRFVVFSVSWRRYFGGHRRTQRVLLSYLAGDPVYAQFVLRHPEPAPSGCATTRQQGYFLGLALTNWAAWHVASLAGIFLADAIPAAWGLRFIGVLALLALALPMLTDRAVRCSALAAGMVALATASWPMGLNVVAAIATAFAAGTWADRRWGAR*