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SCNpilot_cont_300_bf_scaffold_329_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 21377..23116

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI0003612135 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 577.0
  • Bit_score: 1007
  • Evalue 4.40e-291
Variovorax paradoxus strain MEDvA23 contig_53, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27711.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 577.0
  • Bit_score: 965
  • Evalue 3.50e-278
histidine kinase similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 577.0
  • Bit_score: 953
  • Evalue 4.00e-275

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
GTGCGCGCCAGCGGCTGGAACGACACCGCCCCGCCCGCCGAAGGCTGGATGCCCGTTACCCTGCCCGACAGCTGGGCCGCGCGCTGGCCGGGCTTCGACGGCGTGGTCTGGTACAGGCTCACCTGGGAGCAGCCCGAGCAGGTGCATGAAGCCGGCCTGCTGCTGCACTACCTGAACATGGCCGGCGAGGTGTCGCTCAACGGCACGCCGATTTCGCGCGACGACAGCCTGGTGGAGCCGCTCACCCGCGCATGGAACACGCCGCGCTACTGGCTGCTGGCGCCGCCGCTGCTTCGGCCCGGCACCAACACGCTGCTGGTGCGGGTGTCGGGCCTGTTCGCCTACCAGGCCGGACTGGGGCCGGTGAGCCTTGGAGAGCCGGCCGCGATGCAGGCGGACTTCGAACGCGAGCGGCTGATCCGCCGCGACCTGCAGGTGCTGGGCCTGGCGGTGAGCGCGGCGGCCTCGGCCTTCTTCGCGGCCCTGTGGCTATTGCGCCGGCGCGAGACGGCCTACGGCTGGTTCGCGCTGATGTCGGTGCTGTGGCTGCTGTTCGGCTACAACCAGATCGCGACCAGCCCCTGGCCCTTTGCCAGCAACCACGGCTGGCAGGCGCTGAACACCTCGACGCTGCTGGTCTTCGGCTGGTGCTACGTGGTCTTCGCGCTGCGCTTCTGCGGGCGGCGCATGCCCCGGTTCGAGGGCGCCGCGCTGCTGGTCGTGGCTGCCGGCGTGCTCGACCTGTGGCTGGCGCCCGTCGCCGACCTGATCTCGCACCGCGCCGTCTGGACGCTGGTGGGCGGCCTCACCGTCATCGTGGTGAACAGCACCTCCATCGTGCACGCGCTGCGCCACCGCCACAGCCCGATGCGCTCGCTGGCGCCGTTCATGGCGGTGTCGGCGCTCACCGGTGCGCACGACCTGCTGGTGTTCACGCAGATCATCGACAGCAATACCTACTACACGACGATGTCCTCGTACGCCCTGCTGCTGGGCATGGCGCTGACGCTGGCGGCGCAGTTCGTGAAAAGCCTCAAGCGCATCGAGAACTTCAACACCGAGCTGATCGAGGAAGTGAACGCCGCCAAGGCCGACCTCGCCGCCACGCTGGCGCAGCAGCATGCGCTGGAGCTGACGCATGCGCGCATCGGCGAGCGCATGAACCTGGTGAGCGACCTGCACGACGGGCTCGGCGGCATGCTGGTGGGCAGCATCGCCAAGCTGGAGCGCACGCCCGAGGACCTCAGCGCGCCCGAGCTGCTGGCCATGCTCAAGCACCTGCGCGACGACCTGCGGCTGATCATCGACGCCACCGGCCGCGACGACGGCGCGCGCGCGCTGGGCGAGCTGCTGGCGCCGATGCGCTACCGCAGCGCGCAATTGCTGGACGCCAACGGCATCGACTGCCGCTGGAGCGTGTCGAACATCGAGACGCTCGAACTGCCCGCCTCCCAGAGCCTCGACCTGATGCGCTTCTTGCAGGAGGCGCTGACCAACGTGCTCAAGCACAGCGCCAGCCGGCGCGTGGACGTGACCGTGGCGCGCGCCGGGGCGGAGCTTCGGCTCAGCGTGCGCGACGACGGACGGGGCTTTGTCGTGGAGAACATCGACAAGGCCACCGGCGCCGGCCTGCGCAGCCTGCGCGCCCGCGCGCGGCGGCTCGGAGCGCAGCTGCAGCTGCAATCAAGGCCCGGCGAAACCCAGGTGCTGCTGCGCATGCCGCTGGGCGCGCGGCCCTGA
PROTEIN sequence
Length: 580
VRASGWNDTAPPAEGWMPVTLPDSWAARWPGFDGVVWYRLTWEQPEQVHEAGLLLHYLNMAGEVSLNGTPISRDDSLVEPLTRAWNTPRYWLLAPPLLRPGTNTLLVRVSGLFAYQAGLGPVSLGEPAAMQADFERERLIRRDLQVLGLAVSAAASAFFAALWLLRRRETAYGWFALMSVLWLLFGYNQIATSPWPFASNHGWQALNTSTLLVFGWCYVVFALRFCGRRMPRFEGAALLVVAAGVLDLWLAPVADLISHRAVWTLVGGLTVIVVNSTSIVHALRHRHSPMRSLAPFMAVSALTGAHDLLVFTQIIDSNTYYTTMSSYALLLGMALTLAAQFVKSLKRIENFNTELIEEVNAAKADLAATLAQQHALELTHARIGERMNLVSDLHDGLGGMLVGSIAKLERTPEDLSAPELLAMLKHLRDDLRLIIDATGRDDGARALGELLAPMRYRSAQLLDANGIDCRWSVSNIETLELPASQSLDLMRFLQEALTNVLKHSASRRVDVTVARAGAELRLSVRDDGRGFVVENIDKATGAGLRSLRARARRLGAQLQLQSRPGETQVLLRMPLGARP*