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SCNpilot_cont_300_bf_scaffold_180_curated_21

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(18637..19857)

Top 3 Functional Annotations

Value Algorithm Source
poly(3-hydroxybutyrate) depolymerase n=1 Tax=Variovorax paradoxus RepID=UPI000377731F similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 406.0
  • Bit_score: 788
  • Evalue 3.80e-225
polyhydroxyalkanoate depolymerase, intracellular similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 405.0
  • Bit_score: 779
  • Evalue 5.60e-223
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:AGU48881.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 405.0
  • Bit_score: 779
  • Evalue 2.50e-222

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGCTGTACCGGGCCTACCAGAACCAAGCCGACCTGCTCTCCCCGGCACGGCTCGCGGCGCAGTACCTGGGCCAGGCCCTGTGGAAGGAAGGCACCGAACGCACCATGCTGAGGCGCATGGCCGCGCAGTTCGAGGTGTTCTCGCGCATGCGGCTCACGCACACGCGGCCGCCCTACGGCATTGCCAGCGTGCCGGTCGACGGCGCCGACGTGGCCGTGCACGAGGAAAAGACCCTGGTCTCGCCGTTCGGCACCCTGCTGCATTTCAGGAAGGACACCAAGGCGGTGCATCCGCCCGTGCTGCTGGTCGCACCACTGTCGGGCCATTTCGCGACGTTGCTGCGCGAAACCGCGCGCACGCTGCTGCGCGACCACGACGTGTACCTGACCGACTGGCACAACGCGCGCGACGTGCCGCTCTGGGAAGGCGCCTTCGGCCTGGACGACTACACGCTGCAACTCATGCGCTTCCTGGAGGCCGTGGGCCCGGGCGTGCACATGGTGGCCGTGTGCCAGCCCTGCGTGGCCGCGCTGGCCGCCACCGCGCTGATGGCCGAGGACGACAACCCCGCCACGCCGCGCAGCCTCACGCTGATGGCCGGCCCGGTCGATTGCCGCATCAATCCGACCGCGGTGAACAAGCTCGCGACCGACCGACCGATCGACTGGTTCCGGCGCAACCTCATCAGCCATGTGCCGTGGCCGCACGCGGGCGCCATGCGGCGCGTGTACCCGGGCTTCCTGCAGCTGTCGGCCTTCATGAGCATGAACCCCGAGCGCCACAAGAAGCAGTTCCAGGACATGTACACCCACCTGGTCGAAGGCGACATCGACAAGGCTCGCACCATCGGCACCTTCTACGACGAGTACCTGGCGGTGAACGACCTGCCGGCCGAGTTCTACCTGGAGACGGTGGAGCGCGTGTTCCAGACCTACGACCTGCCGCGCGGCAAGCTCACCGTGGGCGAGCGCACCGTGAACCCCGCCGCCATTCGCCGCACCGCGCTGCTGACGGTGGAAGGCGAGCGCGACGACATCTGCGCCGTGGGCCAGACGGTGGCGGCGCAAGACCTCTGCACCGGCATCCGCCCCTACCTCAAGGCGCACCACCTGCAGGCCGGCGTGGGCCACTACGGCGTGTTCAGCGGCAGCAAGTGGAATGCGCAGATCTACCCGCGCGTGCGCGAAACCATCCACGCGGCTGCCGAACTGAACGGCTGA
PROTEIN sequence
Length: 407
MLYRAYQNQADLLSPARLAAQYLGQALWKEGTERTMLRRMAAQFEVFSRMRLTHTRPPYGIASVPVDGADVAVHEEKTLVSPFGTLLHFRKDTKAVHPPVLLVAPLSGHFATLLRETARTLLRDHDVYLTDWHNARDVPLWEGAFGLDDYTLQLMRFLEAVGPGVHMVAVCQPCVAALAATALMAEDDNPATPRSLTLMAGPVDCRINPTAVNKLATDRPIDWFRRNLISHVPWPHAGAMRRVYPGFLQLSAFMSMNPERHKKQFQDMYTHLVEGDIDKARTIGTFYDEYLAVNDLPAEFYLETVERVFQTYDLPRGKLTVGERTVNPAAIRRTALLTVEGERDDICAVGQTVAAQDLCTGIRPYLKAHHLQAGVGHYGVFSGSKWNAQIYPRVRETIHAAAELNG*