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SCNpilot_cont_300_bf_scaffold_180_curated_79

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(82490..83842)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, DctM subunit n=1 Tax=Variovorax sp. CF313 RepID=J2T0I1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 450.0
  • Bit_score: 874
  • Evalue 4.50e-251
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EJL71462.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 450.0
  • Bit_score: 874
  • Evalue 6.30e-251
TRAP C4-dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 450.0
  • Bit_score: 695
  • Evalue 1.20e-197

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGGCATTGACAGTGCTGTCGCTGAGCTTCGTGCTCTTCCTGCTGCTCGGCATGCCGGTGGCCTTTGCCATCGGGCTGAGCTGCCTGGCCACCTTCGCCTACGAAGGCCTGCCGTTCGAGACCGCCATCCAGATGATGGTCTCGGGCATGAACGTGTTCTCGTTCCTCGCCATTCCGTTCTTCATCTTCTCGGGCGAGCTGATGCTGCACGGCGGCATCGCCGACAAGATCGTCGCCTTCGCGCGCAGCCTGGTGGGCCACTGGAAGGGTGGCCTGGGGCTGGCCAACGTGGTGGCGTCGACGCTGTTCGGCGGCGTCTCCGGTTCGCCGGTGGCCGACACCTCGGCCATGGGCGGCGTGATGATCCCGATCATGAAGCGCGAGGGCTACAGCGCGGCTTACGCGGTGAACGTGACGACGCACGCCTCGCTCTCGGGCGCGCTGATGCCGACCTCGCACAACATGATCATCTACGCCTTCGCCGCGCAGGCGGCCGTGGGCACGATCGACGGGCACATCATCAAGGGCGTGTCCATCGGCGACCTGATGTTCGCGGGGCTGATCCCGGTGTTCTGGATCATGGTGTGCATGCTGGTGGCCGCCTACTGGCAGGCCGCCAAGCACGGCTACCCCAAGCGCACCGACGGCAGCACCATGCTCGAGCGCTTCCCCGGCTGGGGCATGGTGGGCAAGACCTTCCTGGCGGCCATTCCGGGGCTGATGGTGATCGTGATCATCCTGGTGTGCGTGATGCAGGGCGTGGCCACGGCCACCGAGGCGGCGGCCATCGCGGTGACGTATTCACTGCTGCTCACCGTGGTGGCCTACCGCACCATGACGCGCGAGAAGCTCTTCAAGTCGCTGGCCAAGGCCTCGAAGACCACGGGCGTGATCCTGCTGCTGATCGGCGTGTCGAACATGCTGCGCTACCAGATGGCCTACCTGGAGATTCCGGACGCCATCGAGACGGTGCTGCTGGCCGCCACCACCAGCCCCTGGCTGATGCTGCTGTACATCAACATCATCCAGATCTTCCTGGGCATCTTCCTGGACATGGCGGCGCACATCCTGATCACCACGCCGCTGTTCCTGCCGCTGGCCATCCAGATGGGCGTGGGTCCGGTGCAGTTCGGCATGATGCTGCTGCTGAACTGCGCGCTGGGCCTGGTGCATCCGCCGGTGGGCACGGTGCAGTTCATCGGCTGCGCCATAGGCAAGATATCCATCGGGGAAGCGACGAAAACCGCCTGGCCCTACTATCTGGCGATCTTCATCGCCATCACCCTGGTGACCTACGTGCCGGCCTTCTCCACTTGGCTGCCCACGATGCTGACCGGCCACAAGGTGCTGTAA
PROTEIN sequence
Length: 451
MALTVLSLSFVLFLLLGMPVAFAIGLSCLATFAYEGLPFETAIQMMVSGMNVFSFLAIPFFIFSGELMLHGGIADKIVAFARSLVGHWKGGLGLANVVASTLFGGVSGSPVADTSAMGGVMIPIMKREGYSAAYAVNVTTHASLSGALMPTSHNMIIYAFAAQAAVGTIDGHIIKGVSIGDLMFAGLIPVFWIMVCMLVAAYWQAAKHGYPKRTDGSTMLERFPGWGMVGKTFLAAIPGLMVIVIILVCVMQGVATATEAAAIAVTYSLLLTVVAYRTMTREKLFKSLAKASKTTGVILLLIGVSNMLRYQMAYLEIPDAIETVLLAATTSPWLMLLYINIIQIFLGIFLDMAAHILITTPLFLPLAIQMGVGPVQFGMMLLLNCALGLVHPPVGTVQFIGCAIGKISIGEATKTAWPYYLAIFIAITLVTYVPAFSTWLPTMLTGHKVL*