ggKbase home page

SCNpilot_cont_300_bf_scaffold_180_curated_83

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(86399..87220)

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent epimerase/dehydratase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V7U4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 271.0
  • Bit_score: 534
  • Evalue 5.10e-149
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 271.0
  • Bit_score: 534
  • Evalue 1.60e-149
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADU36107.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 271.0
  • Bit_score: 534
  • Evalue 7.20e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGGAAGCGTCGAACAAGAAACTCAACCGCCTGCTGCTGACCGGCGCCGCCGGCGGCCTGGGCAAGGTGCTGCGCGAGCGGCTCAAGCCGTATGCGAAGGTGCTGCGCCTGTCGGACATCGCGTCGCTGGCCCCGGCCGCCGACGCGAGCGAGGAAGTGGTGCCCTGCGACCTGTCGGACAAGGCCGCGGTGCACGCGCTGCTGGAAGGCTGCGACGCCATCGTCCACCTGGGCGGCGTGTCGGTCGAGCGGCCGTTCGAGGAGATCCTCGAGGCCAACATCAAGGGCATCTTCAACGTGTACGAAGCCGCGCGCCGCCACGGCGTGAAGCGCGTGGTGTTCGCCAGCTCGAACCACGTGATCGGCTTCTACAAGCAGAGCGAGCACATCGACGCGCACGCAGCGCGCCGGCCCGACGGCTACTACGGCCTGTCGAAGTCCTTCGGCGAGGACATGGCGCAGTTCTACTTCGACCGCTGGGGCATCGAGACGGTGAGCATCCGCATCGGCTCGTCGTTCCCCGAGCCGCTCAATCGCCGCATGATGAGCACCTGGCTCAGCTACCGCGACCTGACGACGCTGATCGAGAAGTCGCTGTTCACGCCCGATGTGAAGCACACGATCGTCTACGGCATGTCGAACAACCGCGACGTGTGGTGGGACAACAGCGCCGCCGCGCATCTGGGCTTCGTGCCGCAGGACAGCTCCGAAGTGTTCCGCGACAAGGTCGAGCAACAGCCGCCCGTGGCCCCCACCGACCCGAACGCCATCTACCAGGGCGGCGCGTTCACCGCACAAGGCCCGTTCGGCGATGAGCGCTGA
PROTEIN sequence
Length: 274
MEASNKKLNRLLLTGAAGGLGKVLRERLKPYAKVLRLSDIASLAPAADASEEVVPCDLSDKAAVHALLEGCDAIVHLGGVSVERPFEEILEANIKGIFNVYEAARRHGVKRVVFASSNHVIGFYKQSEHIDAHAARRPDGYYGLSKSFGEDMAQFYFDRWGIETVSIRIGSSFPEPLNRRMMSTWLSYRDLTTLIEKSLFTPDVKHTIVYGMSNNRDVWWDNSAAAHLGFVPQDSSEVFRDKVEQQPPVAPTDPNAIYQGGAFTAQGPFGDER*