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SCNpilot_cont_300_bf_scaffold_1515_curated_12

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11677..12243

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Variovorax sp. CF313 RepID=J2KJY7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 188.0
  • Bit_score: 374
  • Evalue 8.00e-101
PAS domain S-box {ECO:0000313|EMBL:EJL73388.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 188.0
  • Bit_score: 374
  • Evalue 1.10e-100
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 188.0
  • Bit_score: 373
  • Evalue 5.60e-101

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGCCCGAGATCGATTACCGGCTGGCCTTTGAACACGCGCCCGTCGGCATGGTGGTTTCGAGCAACCGCACCATCGTGGCCTGCAATGTGCGCGTGTGCGAGATTTTTGGCGCAACGCCCTCCGCACTGGTCGGGCATTCGTTCAGCATCCTGTACCCCAGCGTGGCCGAGTTCGAGCGCATCGGCAAGCGCATGGAGCCATTCCTGAACGCCAGCGGGCACTACGCCGACAACCGCATGATGAAGCGGCTGGGCGGCCTGCACGGCTCCATTGCCGGCGAGACCTTCTGGTGCCACGTGACGGGCCACGCGCTGAACCGCGCGGCGCCGCACGAAGCCGGCATCTGGACCTTCGAAGATTTGGGCTCGCGCCGCGCGGTGAAGGCCGAACTGACGCCACGCGAACGCGAAGTGGCCGCACAGGTGATGCGCGGACTGACCTCGAAGGAAATCGGCAAGGCACTCGGCATCAGCCACCGCACGGTCGAGCTGCACCGGGCACGGCTGATGCGCAAGTACGCGGCCTCGACCACGGCGGAGCTGGTTCAGAAGCTCATTGCAGGCTAG
PROTEIN sequence
Length: 189
MPEIDYRLAFEHAPVGMVVSSNRTIVACNVRVCEIFGATPSALVGHSFSILYPSVAEFERIGKRMEPFLNASGHYADNRMMKRLGGLHGSIAGETFWCHVTGHALNRAAPHEAGIWTFEDLGSRRAVKAELTPREREVAAQVMRGLTSKEIGKALGISHRTVELHRARLMRKYAASTTAELVQKLIAG*