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SCNpilot_cont_300_bf_scaffold_83_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 4692..4976

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer TrbD transmembrane protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UAH6_RALPJ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 195
  • Evalue 3.30e-47
putative conjugal transfer TrbD transmembrane protein; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 195
  • Evalue 1.00e-47
Putative conjugal transfer TrbD transmembrane protein {ECO:0000313|EMBL:ACD27773.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 195
  • Evalue 4.70e-47

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Taxonomy

Ralstonia pickettii → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGAGCGCGGCCCACGATGGCGTGCAGGGGTTCGCTCCGGGGTTCGAAGTGCCACTGCACCGCTCGCTGACCGAGCCGATCCTGCTGGGCGGCGCGCCGCGCACGGTGGCGATTGCCAATGGCACCTTGGCCGCGGCCGTGGGCTTGGGCCTGCAACTGTGGATTCCGGGCCTGGTGCTCTGGATCGCCGGCCATGCGTTGGCGGTCTGGGGCGCGCGTGTCGATCCGCGGTTCATGCAAGTCTTCGCGCGCCATATCAAGCACCGGCCGCTGCTGGACGTGTAG
PROTEIN sequence
Length: 95
MSAAHDGVQGFAPGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGLVLWIAGHALAVWGARVDPRFMQVFARHIKHRPLLDV*