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SCNpilot_cont_300_bf_scaffold_83_curated_22

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(19460..21367)

Top 3 Functional Annotations

Value Algorithm Source
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 635.0
  • Bit_score: 1284
  • Evalue 0.0
threonyL-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 635.0
  • Bit_score: 1282
  • Evalue 0.0
Threonine--tRNA ligase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V401_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 635.0
  • Bit_score: 1282
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1908
ATGATCCAGATCACGCTCCCCGACAACTCGCGCCGCGAGTTCCCCGGCCCGGTTTCGGTGGCCCAGGTTGCCCAGTCCATCGGCCCCGGCCTTGCCAAGATGACGGTGGCCGGCAAAGTCGACGGCAGGCTCGTCGATGCCAGCGACGTCATCGACCATGACGCCAAGCTCCAGATCATCACGCCCAAGGACGACGAGGGCCTGGAGATCATCCGCCACTCGACGGCTCACCTGGTCGGTCATGCGGTGAAGCAGCTCTACCCGACGGCCAAGATGGTGATCGGGCCCGTGATCGACGAGGGCTTCTACTACGACATCTCGTTCGAACGCCCATTCACGCCGGAAGACATGGCTGCCATCGAGGCGCGCATGCGCGAGCTGATTGCGCAGGACTACGACGTGATCAAGAAGATGACGCCGCGCGCGGAAGTCATCGAAGTCTTCCAGTCGCGTGGCGAGGACTACAAGCTGCGCCTCGTCGAGGACATGCCCGACGAGCAGGCCATGGGCCTGTACTACCACCAGGAATACGTGGACATGTGCCGCGGCCCGCACGTGCCGAACACGCGCTTCCTGAAGGTCTTCAAGCTCACGAAGCTGGCCGGTGCCTACTGGCGCGGTGACGCCAAGAACGAGCAGCTGCAGCGTATTTACGGCACGGCCTGGGCCGACAAGAAGCAGCTCGACCAGTACATCCAGCGCATCGAGGAAGCCGAGAAGCGCGACCACCGCCGCCTGGGCAAGGAACTCGACCTGTTCCACATCGACGAAGTGGCGCCTGGCGTTGTGTTCTGGCACCCCAAAGGTTGGGCGATCTGGCAGCAGGTCGAGCAGTACATGCGCGGCATCTACCGCGACACGGGCTACTGGGAAGTGAAGGGCCCGCAGATTCTCGACAAGAGCCTGTGGGAGAAAACGGGCCACTGGCAGAACTACCGCGACAACATGTTCACGACGGAGTCGGAGAAGCGCGAGTACGCGCTGAAGCCGATGAACTGCCCGGGCCATGTGCTGATCTTCAAGAGCGACCTGCGCAGCTACCGCGACCTGCCGCTGCGCTACGGCGAATTCGGCCAGTGCCATCGCAACGAGCCCAGCGGCGCGCTGCACGGCATCATGCGCGTGCGCGGTTTCACGCAGGACGATGGCCACATCTTCTGCACGGAAGACCAGATCCTCGACGAGTGCATCGCGTACACGGCACAGCTGCAGAAGGTCTATGCCGACTTCGGCTTCACGGACATCCTCTACAAGGTCGCCACGCGCCCGGAGAACCGCGTGGGCTCCGATGAGCTGTGGGACAAGGCCGAGCATGCGGTGATGGAATCGCTGCGCCGTTCGGGCGTCGACTTCGTCATCTCGCCGGGCGATGGCGCCTTCTACGGCCCGAAGATCGAGTACACGCTGCGCGATGCCATCGGCCGTCATTGGCAGTGCGGCACGATGCAGGTCGACTTCAACACGGCGGAGCGCCTGGGCGGCGAATACGTGACGGAATCGAGCGGCCGTGCGCACCCGGTGATGCTGCACCGCGCTATCGTCGGCAGCCTGGAGCGCTTCATCGGCATGCTGATCGAACACCACTCGGGCGCGATGCCTGCATGGCTCGCTCCGGTGCAGGTTGCGGTGCTCAATATCAGCGAAGGACAGGCCGACTACGCTGCGCAAGTTGCGAAAACGCTGCAAAATCAAGGGCTTAGGGTTCAGCTAGATCTGCACAACGAAAAGATTACGTATAAAATACGGAAGCATTCGTTGCAAAAGCTCCCTTACATCGTTGTCGTGGGCGACAAGGAAAAGGAAGCAGGTGCCGTCGCAGTGCGCGCCCGGGGAAATCAAGACCTCGGTGCAATGTCCCTCGAATCGTTCGCGCAACGGCTCGTCCAGGATGTTGCTGACAAGCGTTGA
PROTEIN sequence
Length: 636
MIQITLPDNSRREFPGPVSVAQVAQSIGPGLAKMTVAGKVDGRLVDASDVIDHDAKLQIITPKDDEGLEIIRHSTAHLVGHAVKQLYPTAKMVIGPVIDEGFYYDISFERPFTPEDMAAIEARMRELIAQDYDVIKKMTPRAEVIEVFQSRGEDYKLRLVEDMPDEQAMGLYYHQEYVDMCRGPHVPNTRFLKVFKLTKLAGAYWRGDAKNEQLQRIYGTAWADKKQLDQYIQRIEEAEKRDHRRLGKELDLFHIDEVAPGVVFWHPKGWAIWQQVEQYMRGIYRDTGYWEVKGPQILDKSLWEKTGHWQNYRDNMFTTESEKREYALKPMNCPGHVLIFKSDLRSYRDLPLRYGEFGQCHRNEPSGALHGIMRVRGFTQDDGHIFCTEDQILDECIAYTAQLQKVYADFGFTDILYKVATRPENRVGSDELWDKAEHAVMESLRRSGVDFVISPGDGAFYGPKIEYTLRDAIGRHWQCGTMQVDFNTAERLGGEYVTESSGRAHPVMLHRAIVGSLERFIGMLIEHHSGAMPAWLAPVQVAVLNISEGQADYAAQVAKTLQNQGLRVQLDLHNEKITYKIRKHSLQKLPYIVVVGDKEKEAGAVAVRARGNQDLGAMSLESFAQRLVQDVADKR*