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SCNpilot_cont_300_bf_scaffold_83_curated_24

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 22012..22974

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036B9470 similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 319.0
  • Bit_score: 561
  • Evalue 4.60e-157
HTH-type transcriptional regulator GlxA {ECO:0000313|EMBL:CDN55080.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 317.0
  • Bit_score: 467
  • Evalue 2.20e-128
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 317.0
  • Bit_score: 454
  • Evalue 2.50e-125

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Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGAAGATCGACGTACTCGCGCTCGACGGCGTGTTCGACACCGGCTTGTCCACGGTGCTCGACGTGTTCACTACCGCCAATGAACTGGCGGCCATGCTGCAGCTCGACGTGGCGCCGTTCGAAGTCGTGGTGGCGGGCATGCGCAAGCGCGTGCGAACAGCTCAAGGCTTCGCAGTGCCGGTGGCCCGAACACTGGAGGCCGGCGCCGCTGATTGGCTCATCGTGCCCGCACTCGGCTGCAAGATGCCAGAAACACTGGAGCCCGCATTGCAGCGCGCCGACGTGCGCGATGCTTGCAGCGCACTGCGGGAGCGCACGAGCAAGGGCGCCCACATCGCTGCAGCCTGCATCGGCACCTTCGTGCTCGCCGAAGCCGGCGTGCTCGACCACCAAAAGGCGACCACGACCTGGTGGCTCGCCACGCTGTTCCGCCAGCGCTATCCCGCCGTGCAACTGGAAGATTCGCGCATGCTCGTCAGCTCCAGCCACCTCGTCACGGCCGGCGCGGCGCTGAGCCATGTCGACATGGCGCTGTGGATCGTTCGACAGGCAAGCCCCGAACTCGCCACGCTGGTCGCGCGCTACCTCATCGTCGATTCACGTCCGTCGCAATCGGCCTACGTGATCTCGGACCACCTCTCGCACTCCGACCCGCTGGTGGAGCGCTTCGAACGCTGGGCGCGTGGCCGACTGGCCCTTGGCTTTTCGCTCGACGAGGCCGCGCAGGCCGCGGGCACCAGCAAGCGCACGCTGGCGCGCCGCATGCAGCAGGTGCTGGGCAAGAGCCCCCTCTCCTACGTGCAGGACCTGCGCGTGGAGCGCGCGGTGCACCTGCTCAAGACCAGCGACAAAAGCCTCGAGCAGATCGCCGGCATGGTGGGCTACGCCGACGGCGTCACGCTGCGCACCCTGCTTCGCCAACGGCTGGGCCGCGGCGTGCGCGAGGTTCGACTCGAAGCCTGA
PROTEIN sequence
Length: 321
MKIDVLALDGVFDTGLSTVLDVFTTANELAAMLQLDVAPFEVVVAGMRKRVRTAQGFAVPVARTLEAGAADWLIVPALGCKMPETLEPALQRADVRDACSALRERTSKGAHIAAACIGTFVLAEAGVLDHQKATTTWWLATLFRQRYPAVQLEDSRMLVSSSHLVTAGAALSHVDMALWIVRQASPELATLVARYLIVDSRPSQSAYVISDHLSHSDPLVERFERWARGRLALGFSLDEAAQAAGTSKRTLARRMQQVLGKSPLSYVQDLRVERAVHLLKTSDKSLEQIAGMVGYADGVTLRTLLRQRLGRGVREVRLEA*