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SCNpilot_cont_300_bf_scaffold_83_curated_28

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 26142..26597

Top 3 Functional Annotations

Value Algorithm Source
SWIB/MDM2 domain-containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V405_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 151.0
  • Bit_score: 270
  • Evalue 7.70e-70
swib/mdm2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 151.0
  • Bit_score: 270
  • Evalue 2.40e-70
SWIB/MDM2 domain-containing protein {ECO:0000313|EMBL:ADU38124.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 151.0
  • Bit_score: 270
  • Evalue 1.10e-69

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGGCAACTGCAAAGAAGGCTCCGGCCAAGAAAGCTCCGGCAAAGAAGGCTGCGGCTCCCGCAAAGAAGGCCGCCGCTCCCGCGAAGAAGGCTGCTGCACCGGCAAAGAAGGCTGCTGCTCCCGCCAAGAAGGCTGCCGCACCGGCGAAGAAGGCTGCTCCTGCAAAGAAGGCCGCACCCGCAAAGAAGGCTGCTCCCGCCAAGAAGCGCACGCCCAACGCAGCGTTCATGAAGGCACTGACCCCCAGCCCGGCACTCGCCGCTGTGGTCGGCTCCACGCCGCTGCCGCGTACCGCCGTCGTGAGCAAGCTGTGGGACTACATCAAGAAGAACAACCTTCAAGACAAGGCCAACAAGCGCAACATCAACGCCGACGCCAAGCTGAAGGAAATCTTCGGCAAGGCCCAAGTGTCAATGTTCGAACTGGCCGCGCTGATCGGCAAGCACGTCAAGTAA
PROTEIN sequence
Length: 152
MATAKKAPAKKAPAKKAAAPAKKAAAPAKKAAAPAKKAAAPAKKAAAPAKKAAPAKKAAPAKKAAPAKKRTPNAAFMKALTPSPALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDKANKRNINADAKLKEIFGKAQVSMFELAALIGKHVK*