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SCNpilot_cont_300_bf_scaffold_83_curated_123

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 131959..132594

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6X6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 211.0
  • Bit_score: 189
  • Evalue 4.10e-45
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG19465.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 211.0
  • Bit_score: 203
  • Evalue 2.20e-49
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 211.0
  • Bit_score: 189
  • Evalue 1.30e-45

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Taxonomy

Cupriavidus basilensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGACCAGCCTGCTCATCATCGACGACCACGCCATGTTCCGCTCCGGCCTGCGCAAGGTGCTGCAGGACGCGCCGGAGATCACCGGCATCGCCGAGGCCGGCGACTGGCGCGGCGGCATGGCCTGCCTGGAGGCGCAGCCCGTCGACGTGCTGCTGCTGGACATCAACATGCCTGAATGCAGCGGGCTCGACCTGATCGGGCCGATTCGCGAGCGTTTTCCGGCGCTGCGCATCATCATGCTGAGCATGTATTCCGAACCGCAGTACGCGGTGCGCGCCTTGCGCAACGGCGCGCACGGCTACGTGGCCAAGGACATGGAGGCGGTCGACCTGATCGCGGCCATCCGAATCGTGAGCCGCGGGCGACAGTTCGTGGCGCCGTCGATCACGCGGGCGCTGATGGACAACATGCAGGGGCTGGCGCCAGACCCGCGGCCTCACGAACGCCTGTCTTCGCGCGAGTCGGAGATCCTGCGCATGATCGTGGGCGGCGAGTCGCTCACGGCCATCGCCGAGCGGCTGGCGATCAACGTCAAGACGGTCAGCACCTACCGCCGGCGGCTTCTCGAGAAGATGGGCCTGGGCTCGAACGCGCAGCTGGTGCAGTACGCGGTGCATCACAGGCTGCTGGACTGA
PROTEIN sequence
Length: 212
MTSLLIIDDHAMFRSGLRKVLQDAPEITGIAEAGDWRGGMACLEAQPVDVLLLDINMPECSGLDLIGPIRERFPALRIIMLSMYSEPQYAVRALRNGAHGYVAKDMEAVDLIAAIRIVSRGRQFVAPSITRALMDNMQGLAPDPRPHERLSSRESEILRMIVGGESLTAIAERLAINVKTVSTYRRRLLEKMGLGSNAQLVQYAVHHRLLD*