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SCNpilot_cont_300_bf_scaffold_83_curated_128

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 138223..139491

Top 3 Functional Annotations

Value Algorithm Source
Twin-arginine translocation pathway signal n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CTG3_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 422.0
  • Bit_score: 829
  • Evalue 2.00e-237
twin-arginine translocation pathway signal; K02055 putative spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 422.0
  • Bit_score: 829
  • Evalue 6.40e-238
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ACS20151.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 422.0
  • Bit_score: 829
  • Evalue 2.80e-237

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1269
ATGACCGACCCCATCGACTCGTCCGCCGGCTTCAAGCGTCGCACCCTGCTGCAGGGCACGGCCGGCATCCTGGCCACGGGCATCGCGCCCTTCGTGCATGCGCAGGAAAAAGTCGTGCTGCGCTACCTCGGCACGGCGGTGAACCAGGACAAGGCCATCGCCGAGAAGTTCAAGGCCGACACCGGCATCGAGATCCAGTACGTGGCCGTGACCACCGACGATGTGACCAAGCGCGCGGTGACCGCGCCCAACAGCTTCGACCTGATCGACACCGAGTTCTTCTCGCTCAAGAAGATCGTGCCGACCGGGAACCTCAAGGGCATCGACACCAGGCGCGTGAAGAACGCCGACAAGATCACCTCGCTCTTCACCAAGGGCGAAGTGGCCGGCAAGAAGGTCGGCGACCAGGGCACGGCGCCCGTGAAGGTGATCTACCTCGAGGGCGAGAAGAGCAAGGCCTTCGCCAAGTCGGCCACGCAGTACATGTCGCTGATCCCGACCACCTACAACGCCGACACGCTGGGCATCCGCCCCGACCTGATCAAGCGCCCCATCGGCTCGTGGGCCGAGCTGCTGAACCCCGAGTTCAAGGGCAAGACCGCCATCCTGAACATTCCGTCGATCGGCATCATGGACGCGGCGATGGTGGTGGAAGCCAAGGGCATCCACAAATACGCCGACAAGGGCAACATGACCAAGGCCGAGATCGACCTGACGATCAAGACCCTGATCGAGGCCAAGAAGGCCGGCCAGTTCCGCGCGCTGTGGAAGGACTTCAACGAGTCGGTGAACCTGATGGCCTCGGGCGAGGTGGTGATCCAGTCGATGTGGTCACCGGCGGTGACGGCCGTGCGCAGCAAGGGCATCGACTGCACCTTCCAGCCGCTGAAGGAGGGTTATCGTGCCTGGGCTTCGGGTTTCGGCCTGCCGGCCACGCTGTCGGGCAAGAAGCTCGACGGCGCGTACGAGTTCATCAACTGGTTCCTCGACGGCTGGGCCGGCGCGTACCTCAACCGCCAGGGCTACTACAGCGCCGTGCTCGACACCGCCAAGACCAAGATGGAAGCCTACGAGTGGGCCTACTGGATGGAAGGCAAGCCCGCGGCGCAGGACATCAAGAGCCCGCAGGGAGACGTGATCGCCAAGGCCGGCGCGGTGCGCGACGGCGGCAGCTACGAGCAGCGCATGGGCGGCATCGCCTGCTGGAACGCGGTGATGGACGAGAACGAATACATGGTGAGGAAATGGAACGAGTTCGTCGCGGCCTGA
PROTEIN sequence
Length: 423
MTDPIDSSAGFKRRTLLQGTAGILATGIAPFVHAQEKVVLRYLGTAVNQDKAIAEKFKADTGIEIQYVAVTTDDVTKRAVTAPNSFDLIDTEFFSLKKIVPTGNLKGIDTRRVKNADKITSLFTKGEVAGKKVGDQGTAPVKVIYLEGEKSKAFAKSATQYMSLIPTTYNADTLGIRPDLIKRPIGSWAELLNPEFKGKTAILNIPSIGIMDAAMVVEAKGIHKYADKGNMTKAEIDLTIKTLIEAKKAGQFRALWKDFNESVNLMASGEVVIQSMWSPAVTAVRSKGIDCTFQPLKEGYRAWASGFGLPATLSGKKLDGAYEFINWFLDGWAGAYLNRQGYYSAVLDTAKTKMEAYEWAYWMEGKPAAQDIKSPQGDVIAKAGAVRDGGSYEQRMGGIACWNAVMDENEYMVRKWNEFVAA*