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SCNpilot_cont_300_bf_scaffold_83_curated_132

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(142148..142918)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 257.0
  • Bit_score: 404
  • Evalue 1.80e-110
arginine ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003645C3A similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 257.0
  • Bit_score: 407
  • Evalue 1.20e-110
ABC transporter related {ECO:0000313|EMBL:ACS22184.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 257.0
  • Bit_score: 404
  • Evalue 8.10e-110

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGCCCGCACCCCTGATCGAGATCCGCAATCTCAAGAAGGCCTTCGGGCAGAACGTGGTCCTCAAGGACATCTCGCTGCAGGTCGGGCGCGGCCAGGTGGTCGCGATCATCGGGCCGTCGGGCTCGGGCAAGTCGACGCTGCTGCGCTGCATCAACCTGCTGTCGGTGCCCAATGCCGGGCGCGTCACGGTGGGCGAGCAGACCATCGAGTTCAACGGCGTGCACACCACCTTGCCCAACGAGCGAGCGCTGGCGCGCTTCAGGGCGTCGACGGGCATGGTGTTCCAGCACTTCAATCTCTTTCCGCACATGACGGTGCTGCGCAATGTGATGGAAGGCCCCGTCACCGTGCTGAAGACGCCCAAGCCCCAGGCCGAGGCCGAGGCGCGCGCGCTGCTCGCCAAGGTGGGCCTGCTGGAGCGCGCGGACTACTTTCCCGACAAGCTCTCGGGCGGCCAGAAGCAGCGCGTGGCCATTGCGCGCGCGTTGGCCATGAAGCCCGCTGTCATGCTGTTCGACGAAGCCACGTCCGCGCTCGACCCGGAACTGGTCGGCGAGGTGCTCGGCGTCATCAAGGGCCTGGCCAGGGACGGCATGACCATGATCCTGGTGACGCACGAGATCGGCTTCGCGCGCGAGGTGGCCGACCAGGTGATCTTCATGCGCGACGGCGTGGTCGCCGAAAGCGGGCCGCCGGAAGCGGTGATCGACAACCCGACGCAGGCGGCGACGCAGGCTTTCCTGGGCCGCTTCAAGGGCGCGGCGGCATAG
PROTEIN sequence
Length: 257
MPAPLIEIRNLKKAFGQNVVLKDISLQVGRGQVVAIIGPSGSGKSTLLRCINLLSVPNAGRVTVGEQTIEFNGVHTTLPNERALARFRASTGMVFQHFNLFPHMTVLRNVMEGPVTVLKTPKPQAEAEARALLAKVGLLERADYFPDKLSGGQKQRVAIARALAMKPAVMLFDEATSALDPELVGEVLGVIKGLARDGMTMILVTHEIGFAREVADQVIFMRDGVVAESGPPEAVIDNPTQAATQAFLGRFKGAAA*