ggKbase home page

SCNpilot_cont_300_bf_scaffold_83_curated_134

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(143728..144561)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 3 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1B1_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 277.0
  • Bit_score: 432
  • Evalue 2.80e-118
extracellular solute-binding protein family 3 similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 277.0
  • Bit_score: 432
  • Evalue 8.70e-119
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACS22182.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 277.0
  • Bit_score: 432
  • Evalue 3.90e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
GTGACCATCAAACGAAATTTCATCCGGGCCCTCGTGGCTGCCGTTGCCGCCTGCACCCTCGGGCCGGCGTTTGCCCAGGACCAGGAAAGCTCGCTCGCGCGAGTGCAGCGCACCCATGTGCTGCGCGTGGGGGCCATCGCCGGCGCCATTCCGTATTTCGCCAAGGACCCCGGCACCGGCAAGTGGGAGGGCTTCGGCCCTGACTTCGGCGAGAGCCTGGCCAAGAGCCTGGGCGCCAAGGTCGAATACGTCGAGACCACCTGGGGCAACGCGGTGCTCGACCTGCAGTCCAACAAGATCGACGCCATGTTCGGCCTGGCCCCGTCGCCGCAGCGCGCTGCCATGGTCAACTTTGCCGACACGCTGTTCGAGAACACCTACACGGTGGTCTGCAAGAAGGGCGTACCGCAAAAGAGCTGGGAACAGCTGAACACGCCCGAGACCAAGATCGTGGTGGACATCGGCTCCAGCCACGACCAGCTCGCCCAGCGCGTGCTGCCCAAGGCCGACGTCACCCGGCTGGAGAACTCCGGTGCCGCCACCATGTCGCTGCAAGCCGGCCGCGCCGATTGCCAGGTGCTGGTGATCCTGCTGGCCGAGCCCCTGCTGGCCAAGCGGCCCGGCCTGGGCACGATGTACATCCCGCAGCCGGTCTACACCGCGCCGGTGAGCATCGGCCTGCGCAAGGACTCCGACCCCGGACTGCAGAAGGCGGTGAACGCCTGGCTGGCGCAGGAGCGCAGCAAGGGCGAGGTCCGCAGTGTCATCCTGAAGAACATGGAAAAGCTCGCGGGCGTGCCGGCCAGCGCCTTCCCGCCCGAAATCAAGTTCTGA
PROTEIN sequence
Length: 278
VTIKRNFIRALVAAVAACTLGPAFAQDQESSLARVQRTHVLRVGAIAGAIPYFAKDPGTGKWEGFGPDFGESLAKSLGAKVEYVETTWGNAVLDLQSNKIDAMFGLAPSPQRAAMVNFADTLFENTYTVVCKKGVPQKSWEQLNTPETKIVVDIGSSHDQLAQRVLPKADVTRLENSGAATMSLQAGRADCQVLVILLAEPLLAKRPGLGTMYIPQPVYTAPVSIGLRKDSDPGLQKAVNAWLAQERSKGEVRSVILKNMEKLAGVPASAFPPEIKF*