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SCNpilot_cont_300_bf_scaffold_116_curated_20

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 37565..38284

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036D0F70 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 239.0
  • Bit_score: 395
  • Evalue 3.30e-107
Uncharacterized protein {ECO:0000313|EMBL:KGF81621.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 221.0
  • Bit_score: 187
  • Evalue 2.50e-44
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 220.0
  • Bit_score: 180
  • Evalue 6.80e-43

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Taxonomy

Massilia sp. JS1662 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGTGTCGAGGACGATGGAAAACGGGAACTTCGACGGGGAGGCAACGGCCGACGTGCTGATCGTCGAGGATCAGGCGCTCGTGAGTGCCGGCATGCGCTCCCTTTTGCAGAAGGCAGCACCGCATTACCGGGTCCACGAGGAATCCTCCTTTCAAGGAGCGATTGCGCGGCTGGCCGCCACCTCGTTCCAGTTCGTTTTCATCGACATTCACCTCGGCTCGGAAGCTTCCGGCATGGACGTCCTGCGCTTCGTGCGCGAACGCGAAATGCCCTGCCACGCCATCATGCTGTCGGGCGACGATGACCGTGAGACGGTCCTTTCCTGCATCTCGCAGGGCGCGTCGGGCTACATCACGAAGGCCACCGGAGACGGCGGCGTCTTCTCCGCCGCCATCGAAACGGTCCTCAACAACGGCGTCTATCTTCCTGCGTCGATCCTCGAGCGCGCACCCAGGAACGACACCGTCGCAGACGCCTATGGCCGCACCGCCGCCTCCCTGGGTTTGGCGCCGAGGCAGCGCGAGGTTCTCTACTACCTGTGCCAGGGCTTGCCCAACAAGGCCATCGCGAACCGCATGGGCATCAGCGAGGGCACCGTCCGAAAGTGCTACGTGTCGGAACTGCTGCGATTCTTCGGCGTGGCCCGGCGCACGGAACTGCTGATCGAGGTGTCCCGCCGGCGGATACGGATTGCCGCACCGGCCTCGGAGAGGCCGTGA
PROTEIN sequence
Length: 240
MVSRTMENGNFDGEATADVLIVEDQALVSAGMRSLLQKAAPHYRVHEESSFQGAIARLAATSFQFVFIDIHLGSEASGMDVLRFVREREMPCHAIMLSGDDDRETVLSCISQGASGYITKATGDGGVFSAAIETVLNNGVYLPASILERAPRNDTVADAYGRTAASLGLAPRQREVLYYLCQGLPNKAIANRMGISEGTVRKCYVSELLRFFGVARRTELLIEVSRRRIRIAAPASERP*