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SCNpilot_cont_300_bf_scaffold_116_curated_30

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(51221..51835)

Top 3 Functional Annotations

Value Algorithm Source
Putative isochorismatase n=1 Tax=Variovorax paradoxus B4 RepID=T1X752_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 204.0
  • Bit_score: 373
  • Evalue 1.10e-100
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29565.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 204.0
  • Bit_score: 376
  • Evalue 3.20e-101
putative isochorismatase similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 204.0
  • Bit_score: 373
  • Evalue 3.60e-101

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGAGCGAAGGACAGTCCATCGTCGCGGCCAGAACTGCGCTGGTCGTCATCGATCTGCAGAACGACTTTCTGGACGCCAGGGGCGCCTACGCCCGCGGCGGCGATACCAATCCGCCCGCCTTGCTGTTGCCCGAGCGCGTGGCCGCCGTGGCGCGCGCGCTCAAGGCAGCCGGCGGGCTGGTCGTCGCGAGCCAGTTCACGCTGTGGCCCGACGCCGCTGGTGAGCCGATGGTGTCGCCGCACCTGAAGGCGCTGCGCCCGTACCTGAAGAAGGGGGACTTTGCGCCCGGCAGCTGGGGCCAGGCGAACGTGGACGCGCTCGCGGGCTTGATCGACGTCACAGTCAGCAAGGTGGCGTACTCGGCCTTCTTCAATACCCAGCTCGACTGGGTGCTGCGCCGTGCGGGTATCGACACGGTGGCGGTGTGCGGCATCGTCACCAACGGCGGCGTGGCCAGCACCGTGCGCGATGCCCACATGCGCGACTACCGCACGCTGGTGCTGGCGGACGGCTGCGCGGCCTTCGGCGAGGAGCGCCATCAGACCTCGCTGGCCGACATGCGCAACGTGGCCGAAGTCACGGGGTGCCAGGCCTTCGCCGACTTGCTGGCATGA
PROTEIN sequence
Length: 205
MSEGQSIVAARTALVVIDLQNDFLDARGAYARGGDTNPPALLLPERVAAVARALKAAGGLVVASQFTLWPDAAGEPMVSPHLKALRPYLKKGDFAPGSWGQANVDALAGLIDVTVSKVAYSAFFNTQLDWVLRRAGIDTVAVCGIVTNGGVASTVRDAHMRDYRTLVLADGCAAFGEERHQTSLADMRNVAEVTGCQAFADLLA*