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SCNpilot_cont_300_bf_scaffold_189_curated_138

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 183939..184862

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000377C0B8 similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 304.0
  • Bit_score: 386
  • Evalue 2.50e-104
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 307.0
  • Bit_score: 385
  • Evalue 1.40e-104
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU53680.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 307.0
  • Bit_score: 385
  • Evalue 6.10e-104

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGGACCTGAAACAGCTGGAGTACTTCATTCGCGTGGCCGAGCTCGGCAGCTTCACCCGGGCATCGACGGTGATCGACATCGCCCAGCCCGCATTGAGCCGCCAGGTGCGCCAGCTGGAAGTCGAGCTGCGGCAGAACCTGCTGGTGCGCAACGGCCGCGGCGTGGTGCCGACCGATGCCGGCAAGCGGCTGCTGGAACATGGCCGCGGCATCCTGCACCAGGTGGAGCGTGCGAAGGAAGACATGGGCCGCATGCGCGGCGCGCTGGCCGGGCGTGTGGCAGTCGGCCTGCCGCCGAGCGTGGCCGGCGTGCTGACAGTGCCGCTGGTGCGCTCCGTGCGCGAGCGGCTGCCCGACGCGGCGCTCTCGATCACCGAAAGCCTCTCGACCGCGATGCAGGAATCGCTGCTCACCGGGCGGCTGGACATCGCGCTGCTCTACAACCCGCAGCCTTCGACCGACGTGGACAGCGAGACGGTGCTGGAGGAAGAGTTGTTCCTCGTGAGCGCCATCAAGGGCACGGGACGCGGCAGGCGCGGCGCGCCGCTCGCGCTGGCGCAACTGGCCGATCAGCCGCTGGTGATTCCGACCCGGCCCAACGCGATCCGCATGCTGGTCGAGGCGCAGCTGGGCGCCATCGGGCGGCGGCCGAGCATCGCGCTGGAGATCGACGGCGTGCCCGCCATCCTCGCGCTGGTGGCCGACGGCGCGGGCCATGCGGTGCTGTCGCGCAATGCGGTGGCCATTGCGGAGCGCTCGCAGCGCTATGCGATCCGGCCGATTGCCGAGCCCGGCCTGCGCAGCAGGCTGGCGCTGGCGGCCAGCTCGCAGCGCCCCGTCACGCGCACGCAGCGCGCCATGGGTGAGCTGCTGCGAGAGCTCGTCGAACAGTACCTGGGCGCGGGCGCCGCTCAGAAGCGGTGA
PROTEIN sequence
Length: 308
MDLKQLEYFIRVAELGSFTRASTVIDIAQPALSRQVRQLEVELRQNLLVRNGRGVVPTDAGKRLLEHGRGILHQVERAKEDMGRMRGALAGRVAVGLPPSVAGVLTVPLVRSVRERLPDAALSITESLSTAMQESLLTGRLDIALLYNPQPSTDVDSETVLEEELFLVSAIKGTGRGRRGAPLALAQLADQPLVIPTRPNAIRMLVEAQLGAIGRRPSIALEIDGVPAILALVADGAGHAVLSRNAVAIAERSQRYAIRPIAEPGLRSRLALAASSQRPVTRTQRAMGELLRELVEQYLGAGAAQKR*