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SCNpilot_cont_300_bf_scaffold_189_curated_139

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(184850..185914)

Top 3 Functional Annotations

Value Algorithm Source
Putative porin n=1 Tax=Variovorax paradoxus B4 RepID=T1XM57_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 341.0
  • Bit_score: 406
  • Evalue 3.60e-110
putative porin similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 341.0
  • Bit_score: 406
  • Evalue 1.10e-110
Putative porin {ECO:0000313|EMBL:AGU53678.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 341.0
  • Bit_score: 406
  • Evalue 5.00e-110

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGAAACGACTCACCCGCCTTCCGGCGCTTACCGGGCGCACTGCCCTGCGCGCGCTTCCCGCGCTGGCGCTTTGCACCGCCGCCCATCCCGCCTGGGCGCAGGCCGAGGCTTCCACCGCCAGCGTCCAGGTCTACGGCCTGGTGGATGCCTTCGTCGGCTCCATGCAGCGCAGCGACGAGAAAGGCCGCACCCGGGTGCTGGGCAGCGGCGGCATGACCACCGCCTACTGGGGCGTGCGTGGCGCCGAGAGCCTGGGCGACGGACTGCAGGCGCAGTTCGCGCTGGAGAGCTTCTTCCAGACAGACACGGGCACCTTCGGCCGCAACAGCACCGATCCCTATTTCTCGCGCAATGCGTGGGTGGGGCTGTCCGGCGGCTTCGGGCAGGTGTCGCTGGGCCGGCAGACCAATCCGATGTTCGCGGCCAGCGGAGCCTTCAACCCGTTCGGCGTGTCGCTGCAGTTCTCGCCCTTCATGCTGCACACCTGGCAACCCACCTACAACCGCGCGGTGATCGGCGACAGCGTGTGGGACAACGTCGTGCAATACAGCTCACCCACCTTCGCGGGCCTGCGTGCCAACCTGCTCTACGGCATGGGCGAAGTGACGAACCGCGACAGCGTGCGCAACCTGAACCTGACCCTCAACTACGCGGCCGGCCCGTTCGCCGCGGTGCTGTCGATGCAGCAGGCCAAAACAGGGCCGGGCTTCACCACGGCCATCGGCCGGCAGGACGCCGCGATGCTCGGCGCTTCCTACGACTTCAAGGCGGTGCAGTTGTACGGGCAGTTGCTGCGCACCCGCACGCCCGACATCCGCCTGACCACCGACACCGCGCAACTGGGCGCGGCGGTGCCCGTCGGCGCGGGGCGCTTCATGGCCTCGGTGGCGCGCACCGAACGCAAGGTGACGAACGGCGCCCAGACGCATCGCACCACCTGGGCGGCCGGCTACGACCACTTCCTGTCGAAACGGACCGACCTGTACGCGGTCTACATGCGCGACCGGCTGACGGACTTTCGCGGCAACGGCAGCGTGGGGTTCGGCATGCGTCACCGCTTCTGA
PROTEIN sequence
Length: 355
MKRLTRLPALTGRTALRALPALALCTAAHPAWAQAEASTASVQVYGLVDAFVGSMQRSDEKGRTRVLGSGGMTTAYWGVRGAESLGDGLQAQFALESFFQTDTGTFGRNSTDPYFSRNAWVGLSGGFGQVSLGRQTNPMFAASGAFNPFGVSLQFSPFMLHTWQPTYNRAVIGDSVWDNVVQYSSPTFAGLRANLLYGMGEVTNRDSVRNLNLTLNYAAGPFAAVLSMQQAKTGPGFTTAIGRQDAAMLGASYDFKAVQLYGQLLRTRTPDIRLTTDTAQLGAAVPVGAGRFMASVARTERKVTNGAQTHRTTWAAGYDHFLSKRTDLYAVYMRDRLTDFRGNGSVGFGMRHRF*