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SCNpilot_cont_300_bf_scaffold_189_curated_152

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(199014..200051)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Variovorax sp. CF313 RepID=J2KFJ2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 332.0
  • Bit_score: 584
  • Evalue 9.30e-164
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJL71913.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 332.0
  • Bit_score: 584
  • Evalue 1.30e-163
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 332.0
  • Bit_score: 571
  • Evalue 2.00e-160

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGGAAACCGCCGCCACGACCCCACGGCTGCCGCTGCAGCGCTACCGACTGTTCGAAAGCCACGACGTGGACGAGGCGCGCGAGAGCGTGGCCCGCGTGTTCTGCCCGCACGGCCTGAACATGCTGCGCCCGCGCACCGAACTGGACGCCTGCCACCACAGCGCACGCCTGCACCGGGACGTGAGCCTCAACTATGTGCAGTACGGGCCGGGCGTGCAGATCGAGCCGGGCTACCTGCAGGACTTCTTCCTGCTGCAGATTCCGCTGCGCGGCGGCGCCGACATCCGCTGCGGCGCGCAGCAGGTCGACGCCACGCCCAGCCTCGCCTCGCTGCCCTCGCCCACCGAGCCGCTCTCCATGCGCTGGGCCGACGACAGCCCGCACCTGATCGTGCGGCTGGCAAGGCCGGCGCTGCAGTCGCGGCTGGAAGCGCTGCTGCAGGCACCCGTGCGGCAGGCGCTGGTGTTCGAGCTCGGCGTGCCGCTCGACAACCCCGCGCTGGCGCCGCTGGTGCATTTCATCGACTACCTGCGGCTCACGCTCGATGCCGGCAACGCCCTGCAGACGGGCGGCAACCGCCTGGCCGAGCATGCCGAGGGCTACCTGATGTCGAGCCTGCTGATGTCGGCGCGGCACAACCACTCGGGCGCACTGGCCGGCGACGCGCAGCGCGGCCTGATGCCGCGCGTGGTGCGCAGGGCGCAGGAATTCATGTCGGCGCACGCGGAGCAGCCGGTGTCGCTGGCCGACGTGTGCCGCGAGGTCGGCTGCAGCGCGCGGGCGCTGCAATTGGCGTTTCGTCAGCACGCGGGCCAGGGGCCGATGGAGTTCCTGCGCGAACTCAGGCTCGACAAGGTACGGGCCGACCTGCTGGCCGCGGCGCTGAGCGACGACGGCGGCGGCGTGCGCGAGACGGCGGAGAAATACGGATTCCTCCACCTTGGCCACTTCGCGGCGCAGTACCGCGCCCGCTTCGGCGAAAGGCCCTCCGAGACGCTTGCGCATGGCGCACGCGCCGGCAAAGCCGAGATATCATGA
PROTEIN sequence
Length: 346
METAATTPRLPLQRYRLFESHDVDEARESVARVFCPHGLNMLRPRTELDACHHSARLHRDVSLNYVQYGPGVQIEPGYLQDFFLLQIPLRGGADIRCGAQQVDATPSLASLPSPTEPLSMRWADDSPHLIVRLARPALQSRLEALLQAPVRQALVFELGVPLDNPALAPLVHFIDYLRLTLDAGNALQTGGNRLAEHAEGYLMSSLLMSARHNHSGALAGDAQRGLMPRVVRRAQEFMSAHAEQPVSLADVCREVGCSARALQLAFRQHAGQGPMEFLRELRLDKVRADLLAAALSDDGGGVRETAEKYGFLHLGHFAAQYRARFGERPSETLAHGARAGKAEIS*