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SCNpilot_cont_300_bf_scaffold_421_curated_25

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 34838..36331

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000362BE56 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 497.0
  • Bit_score: 957
  • Evalue 5.80e-276
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL73731.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 497.0
  • Bit_score: 949
  • Evalue 2.20e-273
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 497.0
  • Bit_score: 930
  • Evalue 1.80e-268

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGTTGAAGCGACGCACACTCATGACTTCCGCCATGGCCGCGGCAATCCCGGGTGTCTTCCTGCCCCAGGCGCGCGCGCAGGCCGGCAAGAACACGCTGACGATCGGCATGCCGCTCGAACCGCCGGGCCTGGACCCGACCACCGGCGCGGCATCGGCCATCGCGGAAATCACGCAGTACAACATCTTCGAGACGCTCACCAAGGTGAACGCCGACGGCTCGGTCACGCCGATGCTGGCCGAAAGCTGGTCGTCGTCGCCCGACATGAAGACCTTCGTCTTCAAGCTACGCAAGGGCGTGCGCTTCGAGAACGACCAGCCCTTCAACGCGCACACGGTGAAGTTCTCGTTCGACCGCGCGGGCGGCGCCAAGAGCACCAACAAGGACAAGCGCTTCTTCAGCGAGATCGGCACCGTGGTGCTCGACGAGTACACGGTGGGCGTCAACAGCACACTGCCCAACCCCGATCTGCCCTTCATGCTGGGGCAGTCGACCGCCTGCATCGTCGAGCCCAAGAGCGCCGACACCAACGCCACCGCGCCGGTAGGCACCGGCCCCTACAAGCTGAGTGCATGGCAGCGCGGCGCCTCGTGCACGCTGGTCAAGTCGCCGAGCTACCGCGACCAGAACCTGGCGAAGGTTCCGAAGTTCGTGTTCCGCTTCATGTCGGACACCGCGGCGCAGACCGCCGCGCTGATGGCAAACGACATCGACATCTTCCCGCGCGCGGGCACGCGCTCGGTGGCGCAGTTCAAGGGCAACCCGCGCTTCCAGGTGATCGAAGTGGGCACGCGCGGCAAGGTGATCCTGACCATCAACAACCGCAAGAAACCGCTGGACGACGTGCGCGTGCGCCGCGCGATCCTGGCGGCCATCGACCGCAACGCCATCATCCAGGGCGCGGCGGACGGCTTCGGCAAGCCAATCGGCAGCCATTACGCGATGGGCGCGCCGGGCTTCGTCGACACCACGGCGATGAACCCCTTCGACATCGAGAAGGCGAAGAAGCTGCTGGCCGAAGCCGGCGTGAAGACGCCGCTGGAACTGCGCCTGCAGCTGCCGCCGCCCTCGTATGCACGTCAGGGCGGCGAGATGATCGCTGCGCAGCTGGCGCAGATCGGCATCAACGTGAAGATCCAGAACGTCGAGTGGGCCCAGTGGCTCAGCGGCACTTTCGGCGGCGCGCACGACTTCGACCTGACGATGGTGGCGCACGTGGAGCCCTTCGACCTGGTGAAGTACACCGAGGCCGACTACTACTGGGGCTACGACTCCAAGAAGTTCCGCGACCTGTTCGTCACCATCCAGAACGAAGAGAACAAGAAGCGCCGCGCCGACCTGCTGGCCGATGCGCAGCGCATGCTGGCCACCGACGCGGTGAACGGCTTCCTCTACCAGGCGGTGTTCCCGACCATCGCGCGCAAGGAGGTCAAGGGCCTGTGGCCAAACATGCCGATCGTGGTGAACGACCTGGCCGCGATCTCGTGGGGTTGA
PROTEIN sequence
Length: 498
MLKRRTLMTSAMAAAIPGVFLPQARAQAGKNTLTIGMPLEPPGLDPTTGAASAIAEITQYNIFETLTKVNADGSVTPMLAESWSSSPDMKTFVFKLRKGVRFENDQPFNAHTVKFSFDRAGGAKSTNKDKRFFSEIGTVVLDEYTVGVNSTLPNPDLPFMLGQSTACIVEPKSADTNATAPVGTGPYKLSAWQRGASCTLVKSPSYRDQNLAKVPKFVFRFMSDTAAQTAALMANDIDIFPRAGTRSVAQFKGNPRFQVIEVGTRGKVILTINNRKKPLDDVRVRRAILAAIDRNAIIQGAADGFGKPIGSHYAMGAPGFVDTTAMNPFDIEKAKKLLAEAGVKTPLELRLQLPPPSYARQGGEMIAAQLAQIGINVKIQNVEWAQWLSGTFGGAHDFDLTMVAHVEPFDLVKYTEADYYWGYDSKKFRDLFVTIQNEENKKRRADLLADAQRMLATDAVNGFLYQAVFPTIARKEVKGLWPNMPIVVNDLAAISWG*