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SCNpilot_cont_300_bf_scaffold_937_curated_2

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1941..3350)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1Z0_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 469.0
  • Bit_score: 816
  • Evalue 1.50e-233
Putative protein involved in formation of curli polymers-like protein similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 469.0
  • Bit_score: 816
  • Evalue 4.80e-234
Uncharacterized protein {ECO:0000313|EMBL:ACS22910.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 469.0
  • Bit_score: 816
  • Evalue 2.10e-233

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGATCTCGTTCGAGTCGATCCGCGCATTGCCGCGCCTGAAGAAGACAGCCGCGTCGCGCGGCCTCCTCGCGGCGGCCGCCGTCATGAGCCTGGCCGGTTGCGTGACCGCGCCGCAGCAGCAGCTCGCGCCCAAAGAAGCACCCATCGTGCTCGGCCCCGCCGTGCGCGAGAACATCACGCCGATGGAGGCCACGCTCGCCTGCTTCGGCGACCACGTGGCCGCCATGCAGCGCCCGCCCATCGTCATCACCGTGGGCGACGTGAAGGACTACACCGGCAAGTACAGCATCAACGAAGGCAATGCCATCACGCAGGGCGGCGCGCTGATGGTGTATTCGGCGCTCGGCAAGCTGGGCGGCGCGGTGCAGGTGGCCGAGCGCTTCGACCCCGTCATCGCCGAACGCGAACTCGGCTATGCCGACCGCCGCCAGCTCGGCGACGGCCGCACCCACCAGCTTGCCGGCCCCAACGGCGGCCAGGTGGTGCCGTGGCTGCCGTACTTCGGCGGCTCGATCAACAAGTCCGACTACTTCATCGTCGGCGGCATCACCGAGCTCAACTACAACATCAACTCCGGCGGTGCGGAAGTTGCCGTGAACCAGGTGGGCATCAAGGCCCGAACCTTCAGCCAGTCGGTGGGCGTGGACCTGCGCATCGTCGACACCAAGACGCTGATGGTCATCAAGACCATCAGCCTGACCAAGCAGTTCAACGGCTACGAGGTCGGCTTCAACGTCTTCCGCTTCTTCGGCAGCAAGCTGTACGACATCGACGTCGGCGCCAAGGGCCAGGAGCCGGTGCAGATGGGCGTGCGCGCCGCGCTCGAAGAAGGCGTGGTGCGCCTGGTGGCGGCCGTCTCCAAGGTCGACCCCGAGCCCTGCCTGGGCATGCGCATGTACGACCAGCTGCAGATGGTGCCGGCAGAGAAGCTGCGCAAGGTCGCCAACCCGCTGGTCGACTCGACCGGCGCACCGGTGGTGCAGGGCGAGGCCGTCAACGCGGCCAGCCAGACCGGTGCCAGCCTGTCGGGCTCCAGCGTGCAGATCCCGTTCGAGTTCGGCGCCGCCGCGCTCACCGGCGGCACGCTGAACCTGCTCGACCAGATCGCCGCGTCCGCGGCCAAGGGCGCGACCGATGTCGTGCTCGTGGCACGCGACACCGAGAACTGGGATGCCGGCAAGCGCGACATGCTGACCGACCAGCGCATCGGCGTGGTCACGTCGGCGCTCGCGTCGCGCGGAATCGCGCCCGGCGGCATCAACGTCACATGGCGGCCTGACAAGGCGGACACGTCGATTCATCGCGACGGTCCCGGCCTGCAGGAGATCGCCAGGCTCCGCGTGCAGGGCGCGGGGAGGGGTGGACCGGCCCGCACGGTCCGCGAGGAGAACGCAACCGGAGGGAAGTAA
PROTEIN sequence
Length: 470
MISFESIRALPRLKKTAASRGLLAAAAVMSLAGCVTAPQQQLAPKEAPIVLGPAVRENITPMEATLACFGDHVAAMQRPPIVITVGDVKDYTGKYSINEGNAITQGGALMVYSALGKLGGAVQVAERFDPVIAERELGYADRRQLGDGRTHQLAGPNGGQVVPWLPYFGGSINKSDYFIVGGITELNYNINSGGAEVAVNQVGIKARTFSQSVGVDLRIVDTKTLMVIKTISLTKQFNGYEVGFNVFRFFGSKLYDIDVGAKGQEPVQMGVRAALEEGVVRLVAAVSKVDPEPCLGMRMYDQLQMVPAEKLRKVANPLVDSTGAPVVQGEAVNAASQTGASLSGSSVQIPFEFGAAALTGGTLNLLDQIAASAAKGATDVVLVARDTENWDAGKRDMLTDQRIGVVTSALASRGIAPGGINVTWRPDKADTSIHRDGPGLQEIARLRVQGAGRGGPARTVREENATGGK*