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SCNpilot_cont_300_bf_scaffold_937_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7170..7820)

Top 3 Functional Annotations

Value Algorithm Source
Crp/Fnr family transcription regulator n=1 Tax=Variovorax paradoxus RepID=UPI000371C654 similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 198.0
  • Bit_score: 270
  • Evalue 1.10e-69
transcriptional regulator, Crp/Fnr family similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 198.0
  • Bit_score: 262
  • Evalue 9.40e-68
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AGU53064.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 198.0
  • Bit_score: 262
  • Evalue 4.20e-67

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCTCGTCCAGTCCAGCGAACTGTGCTCCTATCGGCGCAATGCCCATGTTCTCGTCGCCGGGGAATGGACAGACCACATCTACTGTGTTGCCAACGGCCTGTTGCGCGTCGTGGCCCCCAGCGGCAACGATGGCATGGAGGTCACGACCGACTTCATCCGCCCGGACGATTTCTTCCTGGGCCCTTCCCTGAGCGAAGACCGCTACCAGACCAAGCAAGGCTTGATCGCCGCGCTGCCGTCGTCGGTCTACCGGGTGCCCGCCGCAGCGTTGCGCAAGCTGTGTGCAAAGCATCCCGAGGTGGCGCTGGGCTTGCTGGGGCTCGCGATGAAACGCATGTCCGGCATTCGCGGGCAGATGCGCAGCGTGTCGTCGCTGACGTCGGAAGACCTGGTGAGCCGCGTCCTGCGCCAACTGACGTATTTGGCACCTGCGGGGGCCGGTCGCTACGACAAGCGCATCACGCAGTCGGTGATCGCCTCTTACTCGGGGCTCTCGCGCGAGGTGGTCAACAAGACCATGCGTGAGCTGGAGGGCAAGGGGCTCGTTCGTCGGGACGAGGACGGGATTCATGTGTTGCCAGAGTTCAGCGAGGTTCTGGGCCAGCCTCGGGCTTTCGGCAAATCGACCGGGTGCAGCCAACGCATCTAG
PROTEIN sequence
Length: 217
MLVQSSELCSYRRNAHVLVAGEWTDHIYCVANGLLRVVAPSGNDGMEVTTDFIRPDDFFLGPSLSEDRYQTKQGLIAALPSSVYRVPAAALRKLCAKHPEVALGLLGLAMKRMSGIRGQMRSVSSLTSEDLVSRVLRQLTYLAPAGAGRYDKRITQSVIASYSGLSREVVNKTMRELEGKGLVRRDEDGIHVLPEFSEVLGQPRAFGKSTGCSQRI*