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SCNpilot_cont_300_bf_scaffold_174_curated_44

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 54142..54492

Top 3 Functional Annotations

Value Algorithm Source
Sel1 domain protein repeat-containing protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJA5_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 109.0
  • Bit_score: 201
  • Evalue 5.70e-49
Sel1 domain-containing protein repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 109.0
  • Bit_score: 201
  • Evalue 1.80e-49
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:ACS17105.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 109.0
  • Bit_score: 201
  • Evalue 8.00e-49

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGGTCAACTTGGCAGAGGTTGCGCCGCTCATTTGCGTTCCGCTCAATCGAGAAGATCTCGATTTTCTTGTGAAGGCCGATGCGGGTAGTGCCGACGCGCAGAACGACATCGGACAATTGTTTTCGAACGCTGGCAAGCCGAAGATTGCCCTCTACTGGCTTGAGCAGGCTGCACGTCAAGGCCACGCGGACGCCATGCAATGGTTGGGCCGATGCTACATCGGCGGCGAAGGCGTTCCAAAAAACAAAAATATCGGCTTCATGTGGATTGCCAAGGCGGCCGCGCACGGCCATGTCATCGCACAGGCTCAAATGCAAGACTCGTTCACATTTCGCCTGCAGCAGGTCTGA
PROTEIN sequence
Length: 117
MVNLAEVAPLICVPLNREDLDFLVKADAGSADAQNDIGQLFSNAGKPKIALYWLEQAARQGHADAMQWLGRCYIGGEGVPKNKNIGFMWIAKAAAHGHVIAQAQMQDSFTFRLQQV*