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SCNpilot_cont_300_bf_scaffold_174_curated_49

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(58169..58747)

Top 3 Functional Annotations

Value Algorithm Source
Secreted/surface protein with fasciclin-like repeats n=1 Tax=Variovorax sp. CF313 RepID=J2K9K5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 192.0
  • Bit_score: 341
  • Evalue 4.50e-91
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27477.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 192.0
  • Bit_score: 352
  • Evalue 2.70e-94
beta-ig-h3/fasciclin similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 192.0
  • Bit_score: 340
  • Evalue 3.10e-91

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGAAAAAACTCATGATTGCAGTCGGCGTTTCGGTCCTGCTCGGCGCTTGCGCTGGCGGCATGGGCATGAGCGGCAGTGGCAGCAGCGGGATGTCGTCGAACCCGATGGTCGGCGGCGCCGCGATGTACCCGACGAAGGACATCGTCGACAACGCCGTGAACTCGAAGGACCACACGACGCTGGTCGCCGCGGTCAAGGCCGCCGGCCTGGTCGACACGCTGAAGAGCCCCGGACCGTTCACCGTGTTCGCGCCCACCAACGAGGCCTTCGCCGCGCTGCCGGCCGGCACCGTCGACACGCTGCTCAAGCCCGAGAACAAGCCCACGCTGACCAAGGTGCTCACGTACCACGTGGTGCCCGGCCGCATGGACGGCCCCGCGCTGATGAGCGCGATCAACGCCGGCGGCGGCAGGGCCGTGCTGAAGACCGCCAGCGGCGGCACGCTGGTTGCCACGATGAACGGCGGCAACGTGTGGGTGACAGACGCCAAGGGCGGCACCGCGATGGTCACCATCGCCAACGTGTACCAGTCGAACGGCGTGATCCACGTGATCAACAAGGTGCTGCTGCCGGGTTGA
PROTEIN sequence
Length: 193
MKKLMIAVGVSVLLGACAGGMGMSGSGSSGMSSNPMVGGAAMYPTKDIVDNAVNSKDHTTLVAAVKAAGLVDTLKSPGPFTVFAPTNEAFAALPAGTVDTLLKPENKPTLTKVLTYHVVPGRMDGPALMSAINAGGGRAVLKTASGGTLVATMNGGNVWVTDAKGGTAMVTIANVYQSNGVIHVINKVLLPG*