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SCNpilot_cont_300_bf_scaffold_174_curated_89

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 97979..98875

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036D4F9B similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 298.0
  • Bit_score: 544
  • Evalue 5.40e-152
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 302.0
  • Bit_score: 495
  • Evalue 1.20e-137
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34742.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 302.0
  • Bit_score: 495
  • Evalue 5.30e-137

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAATGCGAACTTCAGTCCTACGATTCGTCAACTGCGTGCATTCCTCGCTGTTTACCAGCTGCGCAAGCTCAGCACGGCGGCTCAGCGGCTGTTCGTCACGCAGTCGGCGGTGAGCATGCTGATCCGCCAACTCGAGGACGGGCTGGACACGCGCCTGTTCGACCGCACCACCCGTTCGCTCAAGCCGACCGCGGCGGCCGAGCAGATGATGGTCACGGTCGAGCGCATCCTGCGCGACGTCGATTCGCTCTCGGCCGACTTCCGCGAACTGGCCGCGCTGGAGCGCGGTCGCGTCACGCTGGCCATCACGCCCACGCTCGCCGGCTTCCTGCTGCCCGACGCGATCCGCGCGTTCGCCGAAAAGCATCCGGGCGTGCGCGTGCTGGTGAACGACTGCGCGCCCGACCAGTTCATCTCGCGCATCATCGGCGAGCATGTGGACTTCGGCATCGGCACGCCCGAGCGTCCCGGCGCCGAGGTGGAAGTGCAACGCTTCATGCGCGACCACCTGGCGCTGGTCTGCCGCATCGACCATCCGCTGGCCAAGGCCCGCGTGGTGCGCTGGAGCGACCTGGGCGGCCACCCCGTCATCACGGTGCGGCCGGGCTACGGCGTGCGCCCGCTGATCGACGGCACCGCGGCCGACGCGGGCGTGGCGCTCGACGTGGTGAACGAGGTGTCGTTCCTGTCGACCGCCATCTGGATGACCGCCGCCGGAATGGGCGCGTCGATCATGCCCTCGGCCTTCGCGCGCGCCGAAGCCGATCCGTCGCTGGTCATCAAGATCCTGAGCGCGCCGCGCGTGGCGCGCGATATTTCCATCGTCACCAAGCGCGGCCACTCGCTCTCGGCAGCGGCGCGCGCCTTCATCGAGGCATTGAAGCGCTCCCTATAA
PROTEIN sequence
Length: 299
MNANFSPTIRQLRAFLAVYQLRKLSTAAQRLFVTQSAVSMLIRQLEDGLDTRLFDRTTRSLKPTAAAEQMMVTVERILRDVDSLSADFRELAALERGRVTLAITPTLAGFLLPDAIRAFAEKHPGVRVLVNDCAPDQFISRIIGEHVDFGIGTPERPGAEVEVQRFMRDHLALVCRIDHPLAKARVVRWSDLGGHPVITVRPGYGVRPLIDGTAADAGVALDVVNEVSFLSTAIWMTAAGMGASIMPSAFARAEADPSLVIKILSAPRVARDISIVTKRGHSLSAAARAFIEALKRSL*