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SCNpilot_cont_300_bf_scaffold_174_curated_114

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 120001..122538

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase d; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 868.0
  • Bit_score: 1443
  • Evalue 0.0
DNA ligase D n=1 Tax=Variovorax sp. CF313 RepID=J2KEQ7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 849.0
  • Bit_score: 1529
  • Evalue 0.0
DNA ligase D {ECO:0000313|EMBL:EJL78700.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 849.0
  • Bit_score: 1529
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2538
ATGGGCACGACGGCATCGACGGCGCGCAAGGCACTCGCGCGCTACCACGGCAAGCGCGACTTCTCGCGCACGCCCGAGCCCAAGACCGGCGGCCGGGCGGGCAAGGGCGTGCTGTCCTTCGTGATCCAGAAGCACCACGCGAGCCATCTGCACTACGACTTCCGGCTCGAACTCGACGGCACGCTCAAGAGCTGGGCCGTGCCGAAGGGGCCGTGCCTCGATCCGGCCGTCAAGCGCATGGCGGTGCATGTCGAGGACCATCCGATTTCCTATGCCGGCTTCGAAGGCACCATCCCGCCGAAGCAGTACGGCGCGGGCACCGTCATCGTCTGGGACCGGGGCGACTGGCTGCCCGATGGCGACGCGCGCAAGTCGCTCGCGGCGGGCAAGCTCAAGTTCGAACTGCGCGGCGAGAAGCTGCACGGCCACTGGACGCTGGTGCGCATGCACGGCAAGGGCGATGAGTCGCACGAGCCCTGGCTGCTCATCAAGGAGCGCGACGCCGAGGCGCGCGCGCTCGACGACTACGACGTACTCGAAGAGCAGCCCGCGAGCGTGCTGAGCGGGCGCGGCGTGGACGATGTGGCGCAGCCTGCCAAAAAGATGCCGGCCAAGGCGCCCGCAAAGGTACAAGCAAAGGCACCGAAGAAGGTCGCGCTCCCCGCCACCCTGCAGCCCCAGCTTGCCACCCTGGCGGCGTCTCCGCCCGCATCGCCCGGCGACTGGCTCTACGAGCTCAAGTTCGACGGCTACCGCCTGCTCGCGCGCATCGACAAAGGCAAGGTCCGCTGCTTCACCCGCAACGGGCACGACTGGACCGCGAAGCTGCCCGCGCTCGCCGAGGCGCTCGCGAAACTGTCCACCGGCGCGGCATGGCTCGACGGCGAGATCACCGTCGAAGGCGAGAACGGCGCGCCCGACTTCCAGGCGCTGCAGAACGCCTTCGACCGCGGCGCGACCTCGGCCATCGTCTACTGGCTGTTCGACGCGCCCTTTCTAGACGGCGAAGACCTGCGCGAACTGCCGGTCGAGGAGCGCCGCGCGCGGCTCGCGAAGCTGCTCGGCAAGAAGCCGCCCGCGCCGCTGCGCCTGAGCGAGGCCTTCGATGCCGCGCCGCGCGACCTGCTCGCGTCGTCCGCGCGCATCGGCTTCGAGGGCATCGTCTGCAAGCGCAAGGGCTCGCCCTATGTGCCGCGCCGCTCGCCCGACTGGATCAAGCTCAAGAACCAGCAGCGCCAGGAGTTCGTGATCGGCGGCTACACCGCGCCCAAGGGCGCGCGCGCCGGCTTCGGTGCCTTGCTGCTGGGCGTGCACGACGAGGCCACCGGCCGGCTGCGCTACTGCGGCAACGTCGGCACCGGCTTCGACGCGAAGCGCCTGGCCGACATCAAGGCCAGGCTCGACAGGCTGGCGACCGACGACTGCCCGTTCTCGCCGCAACCGCGCGGCGTCAAGGCGCAGTGGGTCAAGCCGTCGCTCGTGGCCGAGGTCTCGTTCGGCGAATGGACGCGCGAAGACCGGGTGCGCCAGGCGGTGTTCCAGGGCCTGCGCGCCGACAAGCCCGCGCGCGACATCCGGCGCGAGCGGCCGAAGGAAGCTGGCGAGATCGAAGCCGACGCTTCATCGCCAGCGAAGAAGAAAGGAAAACCCGCGCCCATGGCCCAGAAGATCACCCATGCCGACCGCGTGATCGACAAGCACAGCGGCATCACCAAGGGCCAGCTCGCGGCCTACTACGACAGCGTGGCCACGCTCATGCTGCCGCACCTGCGCGGGCGGCCGGTGTCGCTGGTGCGCGCGCCCGAGGGCGTGGGCGGCGAGCTGTTCTTCCAGAAGCACGTGCAGAACCGCGAGATCCCCGGCGTGCGCCTGCTCGACCCCGCGCTCGACCCCGGCCACGAGCCGCTGCTGCAGATCGACACCCGGACGGGCCTTCTGGGCGCCGCGCAGATGAACGTGATCGAGCTTCACACCTGGAACGCCACCTCGCGCGCCATCGGCAAGCCCGACCGCATGACCTTCGACCTCGACCCCGGCGAAGGCGTCGCCTGGCCCCGGATCCAGGAGGCGGCCATGCTGGTGCGCACCCTGCTCGACGAACTGGGCCTGCCTTCGTTCCTGAAGACCAGCGGCGGCAAGGGGCTGCACGTGGTGGTGCCGCTGCGGCGCCAGTACGACTGGGACGCCGTCAAGGGCTTCTCGCAGGCCGTGGTGGCGCATCTGGCCGAGACCATTCCATCGCGCTTCGTGGCCAAGAGCGGTCCGCGCAACCGCGTGGGCAAGGTCTTCGTCGACTACCTGCGCAACGGTTTCGGCGCGACCACGGTGAGCGCATGGTCGGCGCGCTCGCGGCCGGGGCTCGGCGTTTCCGTGCCGCTCGCGTGGGAAGAACTGCCCGTGGTGACGGCGGCCGACCAGTGGAATGTCGGCAACGCGGCCGAGCGCTTCGCAATCGGCAACAAGCCGTGGGCCGCCATGGAGCGCAGCCGCAAGGGCTTGGCCGCGGCGATGAAGCTGCTCGGCTACAGCAGCAAATAA
PROTEIN sequence
Length: 846
MGTTASTARKALARYHGKRDFSRTPEPKTGGRAGKGVLSFVIQKHHASHLHYDFRLELDGTLKSWAVPKGPCLDPAVKRMAVHVEDHPISYAGFEGTIPPKQYGAGTVIVWDRGDWLPDGDARKSLAAGKLKFELRGEKLHGHWTLVRMHGKGDESHEPWLLIKERDAEARALDDYDVLEEQPASVLSGRGVDDVAQPAKKMPAKAPAKVQAKAPKKVALPATLQPQLATLAASPPASPGDWLYELKFDGYRLLARIDKGKVRCFTRNGHDWTAKLPALAEALAKLSTGAAWLDGEITVEGENGAPDFQALQNAFDRGATSAIVYWLFDAPFLDGEDLRELPVEERRARLAKLLGKKPPAPLRLSEAFDAAPRDLLASSARIGFEGIVCKRKGSPYVPRRSPDWIKLKNQQRQEFVIGGYTAPKGARAGFGALLLGVHDEATGRLRYCGNVGTGFDAKRLADIKARLDRLATDDCPFSPQPRGVKAQWVKPSLVAEVSFGEWTREDRVRQAVFQGLRADKPARDIRRERPKEAGEIEADASSPAKKKGKPAPMAQKITHADRVIDKHSGITKGQLAAYYDSVATLMLPHLRGRPVSLVRAPEGVGGELFFQKHVQNREIPGVRLLDPALDPGHEPLLQIDTRTGLLGAAQMNVIELHTWNATSRAIGKPDRMTFDLDPGEGVAWPRIQEAAMLVRTLLDELGLPSFLKTSGGKGLHVVVPLRRQYDWDAVKGFSQAVVAHLAETIPSRFVAKSGPRNRVGKVFVDYLRNGFGATTVSAWSARSRPGLGVSVPLAWEELPVVTAADQWNVGNAAERFAIGNKPWAAMERSRKGLAAAMKLLGYSSK*