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SCNpilot_cont_300_bf_scaffold_174_curated_177

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(207816..208370)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000370D906 similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 186.0
  • Bit_score: 262
  • Evalue 3.30e-67
Rrf2 family protein, putative transcriptional regulator {ECO:0000313|EMBL:EJL77507.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 184.0
  • Bit_score: 257
  • Evalue 1.50e-65
iscR; transcriptional regulator IscR; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 183.0
  • Bit_score: 191
  • Evalue 2.30e-46

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGCGTCTGACGACGAAGGGCGGCTTCGCCGTGACGGCCATGATCGATGTCGCACTGCGCGAGCAGGCCGGCCCCGTGGCCCTGGCGTCGATCGCCAAGCGCCAACACATTGCACGCTCGTCGCTGGAGGCACTCTTCAGCAAGCTGCGCCAGCATGCGCTGGTGAAGGCGACCCGCGGTCCCGGCGGCGGCTACACGCTGATGCGCAAGGCCTCGGAGATCACCGTTGCGGACATCCTGTTCTCGGTCGACGGCCAGGCCGCGCCCGAGGCCGAAGGCGCACCGCCGCACGGCAAGGCCACCACGAATGCAGCCGGCGATTCCGGCTGCTACTCCACCGAAGCGCTCTGGGCATCCGCCAACCACCACGTGATGGAGTTCCTCGACTCCGTGACCCTGCAGAGCCTGGTCGACGACCAGCTCGCCAAGGGCGTGCGCGTCGAAGAAGAAGCCCCGCGCAAGAAAGAGCCCCAGCCGCGCCCCGTGCCCAGCCTGCGGCACGTGAACGCGCCCAACTCCGTGTTCGCATGGAGCGGCGTGTTCGCCAAGCGCTGA
PROTEIN sequence
Length: 185
MRLTTKGGFAVTAMIDVALREQAGPVALASIAKRQHIARSSLEALFSKLRQHALVKATRGPGGGYTLMRKASEITVADILFSVDGQAAPEAEGAPPHGKATTNAAGDSGCYSTEALWASANHHVMEFLDSVTLQSLVDDQLAKGVRVEEEAPRKKEPQPRPVPSLRHVNAPNSVFAWSGVFAKR*