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SCNpilot_cont_300_bf_scaffold_343_curated_17

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 34045..35364

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036C86A2 similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 436.0
  • Bit_score: 787
  • Evalue 9.20e-225
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 431.0
  • Bit_score: 770
  • Evalue 2.10e-220
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU38480.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 431.0
  • Bit_score: 770
  • Evalue 9.60e-220

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGAGTTCCACCTCCACCGCGGCCCAGCCCTACGGCGGACACTTCGACAGCACCGCCGACGCGGTCTACGGCAAGGTCGGCTGGCGGCTGATTCCGCTGCTCTTTCTCTGCTACATCGTGGCCTACCTGGACCGCGTGAACGTCGGCTTCGCCAAGCTGCAGATGCAGGGCGACCTGCAGTTCAGCGAGGCGGTGTACGGGCTGGGCGCGGGCATCTTCTTCATCGGCTACTTCCTGTTCGAAGTGCCGAGCAACGTGGTGATGCACCGCGTGGGTGCGCGCCGCTGGATCGCCCGCATCATGATCACCTGGGGCGTACTGTCGGCCGCCACCATGTTCGTGAGCTCGCCGATGTCGTTCTACGTGATCCGCTTCCTGCTGGGCGCGGCCGAGGCGGGCTTCTTCCCCGGCATCATCATGTACCTGACCTACTGGTACCCGGCCGCGCGTCGCGGCAAGGCGACATCGCTGTTCCTGGCGGCGATTCCGTTCGCGGGCATCCTGGGCGGGCCGCTTTCGGGCTGGATCCTGCAGGGCATGAACGGCGTGCACGGCTGGGCCGGCTGGCAATGGCTGTTCCTGCTGCAGGGCCTGCCGACCGTGGCACTGGGGCTGGTCGTGTGGCGCTACCTCGACGACCGCGTGAAAGACGTGCAGTGGCTCACGCCCGCCGAGCGCGAGCTCATCGCGCGCGACATCGCCAGGGAAGACGCCGCGAAGGCGCAGCCGCGCATCCTCGGCGTGCTGGGCAACGGCCGCGTCTGGCTGCTGGCGCTGGTGTACTTCGCCTATACCTCGGGGCTGTACGGCATCTCGTTCTGGCTGCCGAGCATCATCAAGGCCATCGGCGTGACGGGCGCGCTCGACATCGGGCTGCTCAGCGCCATTCCGTGGACCTTCGGCGTGATCGCGATGTACTTCATGGCCCGCAGCGCCGACCGCCGGCTCGAATACCGCTGGCACAGCGCACTGGCGGCCGTCGTCGGCGCACTCGGCCTGGTGCTGAGCGTGATCTTCCACGGCAACACGACGCTCGCGATGGCCGGCCTCACGCTGGCCACCATGGGCATCATGTCGACCTTTCCGGTCTTCTGGGGCATGCCGACGGCGTTTCTGGGCGGTGCCGCCGCCGCGGCGGGCATCGCGCTCATCAACTCCTTCGGCAATCTCTCGGGCTTCAGCGCGCCGTTTCTCATCGGCCTGATCAAGGACGCGACGCGCAGCACCGATGCGGGGCTGTACATGCTCGCGGCGCTGCTGGTGACCGGCGCGGTGCTGGTGTTGTTCGTCAAGCCCGGCAGCGCTTCGGCGCGGCCCTGA
PROTEIN sequence
Length: 440
MSSTSTAAQPYGGHFDSTADAVYGKVGWRLIPLLFLCYIVAYLDRVNVGFAKLQMQGDLQFSEAVYGLGAGIFFIGYFLFEVPSNVVMHRVGARRWIARIMITWGVLSAATMFVSSPMSFYVIRFLLGAAEAGFFPGIIMYLTYWYPAARRGKATSLFLAAIPFAGILGGPLSGWILQGMNGVHGWAGWQWLFLLQGLPTVALGLVVWRYLDDRVKDVQWLTPAERELIARDIAREDAAKAQPRILGVLGNGRVWLLALVYFAYTSGLYGISFWLPSIIKAIGVTGALDIGLLSAIPWTFGVIAMYFMARSADRRLEYRWHSALAAVVGALGLVLSVIFHGNTTLAMAGLTLATMGIMSTFPVFWGMPTAFLGGAAAAAGIALINSFGNLSGFSAPFLIGLIKDATRSTDAGLYMLAALLVTGAVLVLFVKPGSASARP*