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SCNpilot_cont_300_bf_scaffold_343_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 35375..36781

Top 3 Functional Annotations

Value Algorithm Source
D-lactate dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00037BEAE7 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 471.0
  • Bit_score: 828
  • Evalue 3.80e-237
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26804.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 470.0
  • Bit_score: 819
  • Evalue 1.90e-234
fad linked oxidase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 471.0
  • Bit_score: 808
  • Evalue 1.30e-231

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGGACACGGTCGTGAGTTCCTCCACCCGACGTTCTCCGTCGCCCGAATTGCTCGCGCTGCTGGAGCGCGAGTTCGCGGAGCGCTTTTCCATCAGCCGCGCCGTGCTGCAGCAGCACGGCACCGATGAATCGACCTACCCGCCGCAGCCGCCCGATGCGGTCGTGTTCGTCTGCAGCACCGAGGAAGCGGCCTTCGTGGTCCGGGCCTGCGCGAAGGAGCGCGTGCCGGTCATCGGCTTCGGCGTGGGCTCGTCGGTGGAGGGGCACCTGCTGGCGGTGCAGGGCGGCGTGTGCATCGACTTCTCGCGCATGAACAAAGTGCTGGCGATCCGTCCGGGCGACCTCACGGCCACGGTGGAAGCGGGTGTGACGCGCGGGCAGCTGAACGCGGCGCTGCAGGACACAGGCTTCTTCTTCTCGGTCGACCCCGGTGCCGATGCGTCCATCGGCGGCATGGTGGCCACGGCCGCGTCGGGCACCAACACCGTGCGCTACGGCACGATGCGCGACAACCTCGTGAGCCTCACGGTGATCACCGCCGACGGCAACGTGGTGCGCACCGCCTCGCGGGCGCGCAAGAGTTCGGCGGGCTACAACCTCACGCAGCTGTATTGCGGCTCCGAGGGCACGCTGGGGCTCATCACCGAGGCTACCGTTCGGCTGCATCCGCACCCCGAGGCGTATGCCGCCGCGGCGGTGAACTTTCCGTCTGTGCGCGCGGCGGTCGATTGCGTGATCGAGTCGATCCAGATGGGCGTGCCGCTCGCGCGCGCCGAGATGCTGGATGCGCTGACCATCCGCGCCGTGAATGCGCACAGCCACACCACGCTCGGCGAGAGCCCCACGCTGTTCCTGGAGTTCGGCGCGAGCCGCACGCAGATCGAGGAGCAGGCCGGCATCGTGCGCGAGATCGCGGCCGGCCACGGCGGCGGGGAGTTCCAGTGGGCCAACCGGCAGGAAGATCGCTCGCGCCTGTGGACGCCGCGCCACCACGCCTACTTCGCCTGCCTGCAGCTGAAGGCGGGCAGCCGCAGCCTGACGACCGACGCCTGCGTGCCGCTGTCGGCGCTGGCGCAGTGCATCGACGAGACGCAGGCAGACATTGCCGAGCACGGGCTGCTCGCGCCGGTGTTCGGCCATGTCGGCGACGGCAACTTTCATTGCCTGGTGCTGGTCGATCCGAACAGCGCAGAAGAAAACGAAGCCGCCGAGGCCTTCAGCCACCGGCTGGTGCAGCGCGCGCTGCGCCACGGCGGCACCTGCACCGGGGAGCACGGCGTGGGCATGCACAAGATGAAGTACCTGGCCGAGGAACATGGCGAGCACGGCGTGGCGCTGATGCGCTCGGTCAAGCAGGCGCTCGATCCGCACGACATCTTCAATCCCGGCAAGGTCGTCGGCGTTTGA
PROTEIN sequence
Length: 469
MDTVVSSSTRRSPSPELLALLEREFAERFSISRAVLQQHGTDESTYPPQPPDAVVFVCSTEEAAFVVRACAKERVPVIGFGVGSSVEGHLLAVQGGVCIDFSRMNKVLAIRPGDLTATVEAGVTRGQLNAALQDTGFFFSVDPGADASIGGMVATAASGTNTVRYGTMRDNLVSLTVITADGNVVRTASRARKSSAGYNLTQLYCGSEGTLGLITEATVRLHPHPEAYAAAAVNFPSVRAAVDCVIESIQMGVPLARAEMLDALTIRAVNAHSHTTLGESPTLFLEFGASRTQIEEQAGIVREIAAGHGGGEFQWANRQEDRSRLWTPRHHAYFACLQLKAGSRSLTTDACVPLSALAQCIDETQADIAEHGLLAPVFGHVGDGNFHCLVLVDPNSAEENEAAEAFSHRLVQRALRHGGTCTGEHGVGMHKMKYLAEEHGEHGVALMRSVKQALDPHDIFNPGKVVGV*