ggKbase home page

SCNpilot_cont_300_bf_scaffold_343_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 36872..37846

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V962_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 329.0
  • Bit_score: 556
  • Evalue 1.50e-155
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 329.0
  • Bit_score: 556
  • Evalue 4.70e-156
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38477.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 329.0
  • Bit_score: 556
  • Evalue 2.10e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGGAATTGCGCCAGTTCAGGTATTTCGTTGCCATCGTGGACTGCGGCAGCCTGTCGCGCGCGGCGCAGCAACTCTTCATTGCACAGTCGGCCTTGAGCAAGCAGATGGCCGAGCTCGAATCGGAGCTGGGTACCCAGCTGCTGCTGCGCAGCCGCAACGGCGTGGCGATGACCGAGGCGGGCAAGGTGTTCTACGAATATGCGCAGGGCATCACCAAGCAGGTGAGCGACGCCAAGGCCGCGGTGCATGTCGCGTCCGATTCGGTGGTGGGCTCGGTGGTGGCGGCGCTGCCGCAGAGCGTGTCGCCCATGATCGCGCTGCCGCTCATGCGCGCGGCTGCCCGGCGCTACCCCGACGTGGTGCTGCACCTCAACGAGGAACTCACCGGCAACATGGCCGACCAGCTGCTGCGCGGGCGGGTCGACGTGGCGGTGTTCTCTCCGACCATGCCGGCGGAAGACATCGCCTTCACGCCGCTGGTGGAGGAAGACTTCGTGTTCCTCGAGTCGCCGCAGAGCCCGCACGCGCTGCCGCCCGGCGACGTGAGCATCGAGCAGGCCACGGCGCGTCCGCTGGTGTGGCCGGCCAATGCACACGGGCATTGCACGCGCTGGCTGGTGGACGGGGTGCTCGAGACGGCTGGTTATTCGCCGGCGCAGGTGGCGGCGGAGATCAATTCGGTCTACACGCTGAAGGCGGCGGTCGAGGCCGGGCTCGGGCCGACCATCATGCCGCTGGGCCTGGCGCAGCGCGAGGTGAAGGAGGGGCGGCTGGCGGCGCACCGCATCGCCTCGCCCGCGATGTTTCGCACACTGGGGCTGTGCGTGTCGGTGCACCTGCCGACGACCAACGCAAAGCGCGCGGTGTGCGCGCTGATCGCTGAGGTGATCCGCACGCTGTGCGAGAGCGGCGAGTGGCAGGGCGCGCGCTTCGTGGCGGGCGCTGCCGCCGCCGTGAAAAAGCCGAAGCCCTAA
PROTEIN sequence
Length: 325
MELRQFRYFVAIVDCGSLSRAAQQLFIAQSALSKQMAELESELGTQLLLRSRNGVAMTEAGKVFYEYAQGITKQVSDAKAAVHVASDSVVGSVVAALPQSVSPMIALPLMRAAARRYPDVVLHLNEELTGNMADQLLRGRVDVAVFSPTMPAEDIAFTPLVEEDFVFLESPQSPHALPPGDVSIEQATARPLVWPANAHGHCTRWLVDGVLETAGYSPAQVAAEINSVYTLKAAVEAGLGPTIMPLGLAQREVKEGRLAAHRIASPAMFRTLGLCVSVHLPTTNAKRAVCALIAEVIRTLCESGEWQGARFVAGAAAAVKKPKP*