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SCNpilot_cont_300_bf_scaffold_343_curated_20

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(37843..38559)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000380E4C7 similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 212.0
  • Bit_score: 368
  • Evalue 4.20e-99
Uncharacterized protein {ECO:0000313|EMBL:EKS39805.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 236.0
  • Bit_score: 291
  • Evalue 1.20e-75
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 203.0
  • Bit_score: 270
  • Evalue 3.80e-70

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCATGCGGCCCGTTTTGAAATGACGACAGAACAACGCACAAAGAAGCAAACGGAGCGGGTGCCGAAGGCCAGGGTCGACAAGTTCTCCGAGCGGCGCGCGGAACTGGGCGAGGCCGCGCTCACCACCTTGGCGGCGCTGGGCTATGCGCGCACCAGCCTGCGGGAGATCGCGCAGAACTCCGAGTTCTCGCACGGCGTGCTGCACTACTACTTCACCGACAAGATCGACCTGATCATCTGCAGCGTCAAGCAGTACAAGGCGCGCTGCGTCACTCGCTACGACCACGCGGTCGACAGCGCAACCACCTGCGACGAGCTGATGGAAGGCTTCCTGCAGAGCCTGGCCGACACGCTGCGCGACGAAGGGCACGTGCACCGCCTCTGGTATGACCTGCGCTCGCAGGCGCTGTTCGAGGAAGCATTCCGCTCCGACGTCGTGCAGATCGACAAGAGCCTGGAAGACATGATCTGGCGCATCATGAGCCGCTTCGCGGAGCTGTCGGGCGAAGACCCCGGCATGACGCCCTCGGCCACCTATGCGCTGTTCGACGGGCTGTTCCAGCAGGCGCTGCTCAAGCACCTGTCGGGCGACGCCGGCGCCGTGGCCGCGATGCAGGCCGACGTGCGGCAGTCCATCGTGCGGCTGTTCTCGCTGCCCGCCAAGGCCGCGCCGGCGGCACGCAAGCGCGCTGCCGCTACCGCCAAGGCGCTTTAG
PROTEIN sequence
Length: 239
MHAARFEMTTEQRTKKQTERVPKARVDKFSERRAELGEAALTTLAALGYARTSLREIAQNSEFSHGVLHYYFTDKIDLIICSVKQYKARCVTRYDHAVDSATTCDELMEGFLQSLADTLRDEGHVHRLWYDLRSQALFEEAFRSDVVQIDKSLEDMIWRIMSRFAELSGEDPGMTPSATYALFDGLFQQALLKHLSGDAGAVAAMQADVRQSIVRLFSLPAKAAPAARKRAAATAKAL*