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SCNpilot_cont_300_bf_scaffold_343_curated_45

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(64028..64717)

Top 3 Functional Annotations

Value Algorithm Source
calcium transporter ChaC n=1 Tax=Variovorax paradoxus RepID=UPI00037E0FAF similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 232.0
  • Bit_score: 418
  • Evalue 3.40e-114
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26826.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 233.0
  • Bit_score: 424
  • Evalue 1.10e-115
chac family protein; K07232 cation transport protein ChaC similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 241.0
  • Bit_score: 407
  • Evalue 2.50e-111

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGCCCAAGCCCCTGCGCGATCCGCAACCGATGCTCGAACGCGCCATCGCCGACTGGGGCGGGCACGAGGACCTGTGGCTCTTCGGATACGGCTCGCTGATCTGGCGGCCCGACTTCGGCTTCACCGAGCGCCGGCCCGCCTGGGTGCACGGCTGGCACCGGGCGCTGAAGATGTGGAGCCGGGTCAACCGCGGCAGCGTGCAGGTGCCGGGCCTGGTGTTCGGCCTGCTCTCGGGCGGCAGCGTGCGGGGCATGGTGTTCCGCGTGCCGAAGGCCGAGGGGCTAGAAACCCTGCGCCGGCTCTGGCTGCGCGAAATGCCGACCGGCGTGTACGACCCCAAGTGGCTGCAGTGCGGCACGGCCGAAGGCCCGGTGCGGGCGCTGGCGTTCACGCTGTCGCGGCGCAGCCCCAACTTCACGGGCGAATTGAGCGACGAGCGCTACCGCTATATCTTCGCCAACGCCGTGGGGCGCTACGGCAGCTCGCTCGACTACGCGCAGCAGACGCTGGCGGAACTGCGGCGCCACGCCATCCACGACGCCGCGCTGGCCCGGCTGGTGGCGCTGGCCGCCACGCAACAAGAGCCGCCCGCCGCCGATTGCGATGCACCGCAGGCTCCGGTATATGTTCCGGAGTCCCCAGACAAACCCTCCCAACCCTCCTCCGGACCGTCCAAGGAAAACACATGA
PROTEIN sequence
Length: 230
MPKPLRDPQPMLERAIADWGGHEDLWLFGYGSLIWRPDFGFTERRPAWVHGWHRALKMWSRVNRGSVQVPGLVFGLLSGGSVRGMVFRVPKAEGLETLRRLWLREMPTGVYDPKWLQCGTAEGPVRALAFTLSRRSPNFTGELSDERYRYIFANAVGRYGSSLDYAQQTLAELRRHAIHDAALARLVALAATQQEPPAADCDAPQAPVYVPESPDKPSQPSSGPSKENT*