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SCNpilot_cont_300_bf_scaffold_343_curated_47

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(65490..66476)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. CF080 RepID=J2JNB5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 327.0
  • Bit_score: 461
  • Evalue 8.60e-127
AraC family transcriptional regulator {ECO:0000313|EMBL:KKC34026.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 327.0
  • Bit_score: 473
  • Evalue 1.80e-130
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 325.0
  • Bit_score: 320
  • Evalue 7.50e-85

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Taxonomy

Devosia psychrophila → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGGAAACTGCCGGATACGCACTCGACACGACCTGGCGAACGGTGCTGAAGGACCTCGGCGTCGTACCCGCCGACGTTCTGCGCCTGGCAGGTCTTCCCGACGATCTGCTGCATCAGCCCTCGGTCCGGCTCGCGTCAGCCGATTTCTACCGGCTCTGGGACGGCATCGAAGCCGCGGTGGGCGATCCGTTGCTGCCCCTGAGGCTCTGCCAGGCCATCTGCAGCGAGTCGTTCTCGCCGGTGCTGTTCGCGGCGCTGTGCAGCCCGAACATGCTCGTGGCCGCGCAACGCATCGCGCGCTACAAGACGCTGATCGCGCCGATGCGGCTGGATGTCACGCAGGCGGACGGCCTGACGACCCTCGAGTTCTCATGGCTGGACCACACGGTATCGCCGCCCGCGTCGCTGGTGCTGATGGAGCTGCTGTTCTGCGTGACGCTCGCGCGCATGGGCACGCGCGAGCCCATCCGCCCGGTCGTGGTCCAGGCGCAGGTCCTGCCTTCGCCCCTCGCGCCCTATGAAGAGTTCCTCGGCGCCCGGCTGACGCGCGGCGCGAGGCGCCTCGTCAGCTTCGCGAATGCGGACGCCGCGCTGCCTTTCCTGACATCGAACGAGCCACTGTGGGCGGCGTTCGAACCGGAACTGCGGCAGCGTCTCTCCCATCTCGACGCGCAGGCGACCACGACCCAGCGCGTCCGCGCGGCCCTGCTCGAGGGGCTCCCGAGCGGACTCGTCACCATCGAGGACATCGCCCGCAAGCTGGCATTGAGCAGGCGTACGCTGCAGCGGCGTGTCGATGCCGAGGGAACGAGCTTCCAGCAGATCCTGAACGGCACGCGCGAGGCGCTTGCCCGCCACTATCTCGAGAAGACGGCGCTTCCCATCGCCGAGATATCGTTCCTGCTGGGGTTCGACGAGTCGAACTCGTTCCATCGGGCGTTCCGGGGATGGACCGGGTCGACGCCGGATCGGGTGCGGCGCGGATAG
PROTEIN sequence
Length: 329
METAGYALDTTWRTVLKDLGVVPADVLRLAGLPDDLLHQPSVRLASADFYRLWDGIEAAVGDPLLPLRLCQAICSESFSPVLFAALCSPNMLVAAQRIARYKTLIAPMRLDVTQADGLTTLEFSWLDHTVSPPASLVLMELLFCVTLARMGTREPIRPVVVQAQVLPSPLAPYEEFLGARLTRGARRLVSFANADAALPFLTSNEPLWAAFEPELRQRLSHLDAQATTTQRVRAALLEGLPSGLVTIEDIARKLALSRRTLQRRVDAEGTSFQQILNGTREALARHYLEKTALPIAEISFLLGFDESNSFHRAFRGWTGSTPDRVRRG*