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SCNpilot_cont_300_bf_scaffold_22_curated_48

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 56701..57525

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F2C50 similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 274.0
  • Bit_score: 539
  • Evalue 1.60e-150
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:KGD92420.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 272.0
  • Bit_score: 450
  • Evalue 1.80e-123
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 273.0
  • Bit_score: 411
  • Evalue 2.70e-112

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Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCCGACCACGAGCAAAGGCTTTCCGCTCATGCTGACCTTCGACCTGGACGCGGAGACCATGTGGACCGGCCGCGACCCGGCCAACGCCAAGCGGCCCATCCTGATGTCGCAGGGCGCCTACGGCTGGAAGGTCGGCATGCCGCGCATCCTGGCGCTGCTGGCGCGCTACGGCATCAGCGCCACCTTCTTCATCCCCGGCGAAGTGGCCGACAAGCACCCGGACCTGGTGCGCGAAGTGGTCGACAAGGGCCATGAAGTGGCGCACCACAGCTACAGCCACCGCTGGATCGTCAACCTGAGCCCCGCCGAAGAGCGCGAGGAAATGGAGCGCGGCATGGAAACGCTGACGCGCCTGGCCGGCACCCGGCCGCGCGGCTGGCGCTCGCCGGCGGCGGAGTTCAGCGCCATCACGCTCGACCTGCTCAAGGAATACGGCTTCGACTACTCGTCGAACTTCTTCGACGACGACTCGCCCTACTTGCTGGAGATCGGCGGCGAGCGCACCGACATCGTCGAGCTGCCCTTCCGCTGGGTGCTGGACGACGCGCCCTTCTTCCAGTACTCGATCACCCTGCCCGGCCGCACGCTGCAGGCGCCCTCGGCGGTGCTCGAGGCATGGACCAGCGAGTTCGACATGCTCCATGCCGAAGACCGGATGATGATGGTCGGCATGCACCCGCAGATCATCGGCCAGCCTTCGCGGCTCAAGGTGCTCGAAGGCCTGATCGAGCATGCGCTCGCGCACTCGGGCGTGTGGATCGACCGCTGCGACCGCATCTCCGACGACATGCGGCCGCGCCTGAAGGCGGCCGTCGCAGCATGA
PROTEIN sequence
Length: 275
MPTTSKGFPLMLTFDLDAETMWTGRDPANAKRPILMSQGAYGWKVGMPRILALLARYGISATFFIPGEVADKHPDLVREVVDKGHEVAHHSYSHRWIVNLSPAEEREEMERGMETLTRLAGTRPRGWRSPAAEFSAITLDLLKEYGFDYSSNFFDDDSPYLLEIGGERTDIVELPFRWVLDDAPFFQYSITLPGRTLQAPSAVLEAWTSEFDMLHAEDRMMMVGMHPQIIGQPSRLKVLEGLIEHALAHSGVWIDRCDRISDDMRPRLKAAVAA*