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SCNpilot_cont_300_bf_scaffold_118_curated_65

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 51457..52539

Top 3 Functional Annotations

Value Algorithm Source
Putative mRNA 3-end processing factor n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9H0_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 367.0
  • Bit_score: 683
  • Evalue 9.00e-194
mRNA 3-end processing factor; K07577 putative mRNA 3-end processing factor similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 367.0
  • Bit_score: 683
  • Evalue 2.80e-194
Putative mRNA 3-end processing factor {ECO:0000313|EMBL:ADU39654.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 367.0
  • Bit_score: 683
  • Evalue 1.30e-193

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGCCCGCAACGCAGCCAGAAGATCTCGTCGTCGCCCGGCCCGAAGGCCTGTATTGCCCACCCGGCGATTTCTACATCGACCCGTGGCGGCCGGTGGCGCGCGCGGTCATCACCCACGCCCACTCGGACCACGCACGCACGGGGCATGCGCACTACCTGGCCCACACCGACAGCGCCGGCACGCTGCGCACGCGGCTGGGCGCCGACATCGACCTGCAGACGCTGGCCTATGGCGAGGCCATCAGCCACCACGGCGTGCGCGTCTCCCTGCACCCGGCCGGCCATGTGCTGGGCTCGGCGCAGGTGCGGCTCGAACACGGCGGGCGCGTGTGGGTGGCCTCGGGCGACTACAAGACCGAGCCCGACGGCACCTGCGCGCCTTTCGAGCCGGTGCCTTGCGACACCTTCATCACCGAATCGACCTTCGGCCTGCCGATCAACCGCTGGCCCACGCAGGCCGCGCTGTTCGCCGAGATCGACGCATGGTGGCGCGCCAATGCCGAGGCGGGGCGCGCGTCGGTGCTGTTCTGCTATGCCTTCGGCAAGGCGCAGCGCATCCTGCACGGGGTGGATGCGGGCATCGGGCCGATCGTGGTGCACGGGGCGGTGGAGCCGCTCAATGCCGTGTACCGCGCGGCGGGCGTGGCGCTGCCGCCGACCCTGCGCGTGAGCGACGCGGGCGTCGACGCCGCGCTGCTCAAGCGCGCGCTGGTGCTGGCCCCGCCGTCGGCGCAGGGCACGCCGTGGATGAAGCGCTTCGGCAATTACGCCGATGCGTTCGCGAGCGGATGGATGCAGTTGCGCGGCACCCGAAGACGGCGCGGCGTGGACCGCGGCTTCGTGATGTCGGACCACGCGGACTGGCCCGGCCTGCAGCAGGCGATTGCCGGCACGGGGGCGCAGCGCGTGTTCGTGACGCACGGCAGCGTGCAGGTGATGGTGCGCTGGCTCTCGGAGAACGGGCTGGATGCGCAAGGGTTCAAGACCGAGTACGGCGATGAAGACGACCAGGTGGCGCCCGATGCGAACGCCGAAAGCCCCCATCCCGGCCTTCCCCCGGAGGGGGAAGGAGTCAACGCATGA
PROTEIN sequence
Length: 361
MPATQPEDLVVARPEGLYCPPGDFYIDPWRPVARAVITHAHSDHARTGHAHYLAHTDSAGTLRTRLGADIDLQTLAYGEAISHHGVRVSLHPAGHVLGSAQVRLEHGGRVWVASGDYKTEPDGTCAPFEPVPCDTFITESTFGLPINRWPTQAALFAEIDAWWRANAEAGRASVLFCYAFGKAQRILHGVDAGIGPIVVHGAVEPLNAVYRAAGVALPPTLRVSDAGVDAALLKRALVLAPPSAQGTPWMKRFGNYADAFASGWMQLRGTRRRRGVDRGFVMSDHADWPGLQQAIAGTGAQRVFVTHGSVQVMVRWLSENGLDAQGFKTEYGDEDDQVAPDANAESPHPGLPPEGEGVNA*