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rifoxyd3_full_scaffold_6403_curated_1

Organism: Chloroflexi bacterium RIFOXYD12_FULL_57_15

near complete RP 48 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 7 / 38
Location: 2..1642

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4494663 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 543.0
  • Bit_score: 566
  • Evalue 2.40e-158
  • rbh
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 520.0
  • Bit_score: 527
  • Evalue 3.90e-147
  • rbh
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 547.0
  • Bit_score: 1069
  • Evalue 0.0

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Taxonomy

RIFOXYD12_FULL_Chloroflexi_57_15_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1641
CCGCGACCGCCCTCGTCTTGCAACCAGGGGAAATCACCCCCGCCGCGTCCGCCCAAGCGCAGGGACGATCTGTTGGATGCGCCTGTCCTCGATGAAGGCGCACTGGAGGATGGGCTGGATGTTGAGGGCGTGGAAGAAGACGATGAACTGCGCGGCGCGCCGGACCTGGCGCAGGCTGCCGACGATGTGGTGGAACCCGACCTTTCGAACCTGGCGCAGGTGGAAGACAACCTGCTCGAAAATCCCTTTGAAGAAATTGAAACGCATGAACCATCGGGCGAACTGTCGGATGATCCCGTCCGGCTGTATCTGCGCGAGATCGGGCTGGTCAAACTGCTGGATGTGGACAGCGAGTTCCGCCTCTCGACCTGTATCGAAGCCGAACGCCTGCTCCTGACCTGGAGGCGGCGTCCCGTCCGAAAGGGGCTGGCGCTGGCCTGTTCGGTCTACCACGCCCTCCTCCACGAACTGGATACCTCCTGGACGCGCCTGTCTGAGGACGCGGAAGGTTTGGAGGCCGACCTGCCCGACCTGGCGCTGGCGCTGGCCGAAGCCCAGTCGCTTCACGCGGGATGGGAGACGGCCGCGCCGTCCTATTTGCGTTCCTACCTCGCCAGTGATTTGTGGGGACACGACCTGCTGTGGGACAACCTCGTGCGAAAAGCCTTCTCGGTCTTTTTGTGCCTGTATCTGATTCCCGCCCCCTATGCCGATTGGTTGCTGGCGCACGTCCGCGTCCACCACGCCCTGCCCATCCTGCGGACGATGTACGCGCACCTGCCTGAAAATTCCGCCCTGGAGGCCGGGATGGACGCCGCGCATTTGCGTGCCGAGGATGCGAACCAGGCGCTCATCCGCGCCAACCTGCGGCTGGTGGTGAGCGTGGCGAAGAGGTACCTCGGACGCGGCATCCCGTTCCnnnnnnnnnnnnnnnnnGGGAATCTCGGCCTGTTGCGCGCCATCCACAAGTTCGACCCGCGCCGCGGCTTCAAGTTCAGCACGTACGCCACCTGGTGGGTGCGCCAGTCCATCAATCGTTCCATTGCCGAGCAGGCGCACACCATTCGCGTCCCGGTGCATTTGTTTGAAGCCATCACACGGATATTGCGCGCCCAGCACCGTCTCACCCAGGAATTGGGACGCGATCCCAACTCCGAGGAACTCGCGCTGGAAGTGGGATACCTGCCCACCTCGGATGCGCAGGCCATCCTGCGCGCCCACGCGGAGAGCAAGCCGGTCGAGCCGGCCATTCAGCGCCGACTTGAAACGGCCGCCCGCCGCGTGGGGAACGTGCTCCGCTCGGCGGAAGATCCCGTCTCGCTGGATGTCCCGATCGGGGAGGACAACTCCAGCCAGTTGGAGGATTTCATCCCCGACAACGACTCTCCCTCGCCGCTGGATTCCGCCGTACGCGACATGTTGCGCCAGCAGATCCAGCATGCGCTGGAAGTCCTCACCGAACGCGAACGCCAGGTGCTCGAACTGCGTTTTGGCCTGGCAGACGGACAGGACCACACGCTGGATGAGATCAGCGATACCTTCAGGGTGACCCGCGAACGCGTCCGCCAGATCGAGGCCAAGGCCTTGCGGAAACTCCGCCATCCCATGTACACCCGCCTGCTGAGGGATTATTTGGGGTGA
PROTEIN sequence
Length: 547
PRPPSSCNQGKSPPPRPPKRRDDLLDAPVLDEGALEDGLDVEGVEEDDELRGAPDLAQAADDVVEPDLSNLAQVEDNLLENPFEEIETHEPSGELSDDPVRLYLREIGLVKLLDVDSEFRLSTCIEAERLLLTWRRRPVRKGLALACSVYHALLHELDTSWTRLSEDAEGLEADLPDLALALAEAQSLHAGWETAAPSYLRSYLASDLWGHDLLWDNLVRKAFSVFLCLYLIPAPYADWLLAHVRVHHALPILRTMYAHLPENSALEAGMDAAHLRAEDANQALIRANLRLVVSVAKRYLGRGIPFXXXXXXGNLGLLRAIHKFDPRRGFKFSTYATWWVRQSINRSIAEQAHTIRVPVHLFEAITRILRAQHRLTQELGRDPNSEELALEVGYLPTSDAQAILRAHAESKPVEPAIQRRLETAARRVGNVLRSAEDPVSLDVPIGEDNSSQLEDFIPDNDSPSPLDSAVRDMLRQQIQHALEVLTERERQVLELRFGLADGQDHTLDEISDTFRVTRERVRQIEAKALRKLRHPMYTRLLRDYLG*