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rifoxyb2_full_scaffold_7358_curated_4

Organism: Deltaproteobacteria bacterium RIFOXYB2_FULL_66_7

partial RP 38 / 55 MC: 2 BSCG 36 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1518..2225)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 232.0
  • Bit_score: 309
  • Evalue 7.30e-82
  • rbh
DNA-directed RNA polymerase subunit beta' id=1788706 bin=GWB2_Deltaproteobacteria_65_81 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 236.0
  • Bit_score: 406
  • Evalue 1.40e-110
  • rbh
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 236.0
  • Bit_score: 447
  • Evalue 1.30e-122

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Taxonomy

RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGGGGAAGGATTTCAAGGGGAAACGCAAGATCCAGGTGGTGCCGGAAGTCGGCGCGCCCCGGGAGTACACGATCCCCCGAGGAAAGCACATCACGGTCCACGACGGAGAGCGGATCCGGGCGGGCGAGGCCCTCATGGACGGTTCGCCCAATCCCCACGACATCCTGCGCGTCCTCGGGGACAAGGAGCTTGCCCGGTTCCTCGTCAACGAGATCCAGGAGGTGTACCGCCTCCAGGGCGTGCGGATCAACGACAAGCACATCGAAACGATCGTCCGCCAGATGCTGCGGCGGGTCAAGATCTCGGATCCCGGCGACACCTCGTTCCTCGTGGGGCAGAGCGTCGAGAAATGGATCTTCCGGGAGGAGAACGAACGGGTGGTGAAGCAGGCGGGAGGGAAGCCCGCCACGGCGGAGCCGCTCCTTCTCGGGATCACGAAGGCGTCGCTTTCGACGGAGTCGTGGATCTCCGCCGCCTCCTTCCAGGAGACGACCAAGATCCTTACGGACGCATCGGTCCACGGAAGGGTGGATTACCTCGCCGGCCTCAAGGAAAACGTGATCATGGGCCGCCTCATCCCCGGCGGAACGGGCGCGGCGGCGTACAAGCTCATGGAGTnnnnnnnnnnnnnnnCGCTCGTGGTGGAGGCTCCCCCCATGCCGGAGCCGGAGCCCGAATTTCCGAAGGACGAGGAGGAAGGACGGTAG
PROTEIN sequence
Length: 236
MGKDFKGKRKIQVVPEVGAPREYTIPRGKHITVHDGERIRAGEALMDGSPNPHDILRVLGDKELARFLVNEIQEVYRLQGVRINDKHIETIVRQMLRRVKISDPGDTSFLVGQSVEKWIFREENERVVKQAGGKPATAEPLLLGITKASLSTESWISAASFQETTKILTDASVHGRVDYLAGLKENVIMGRLIPGGTGAAAYKLMEXXXXXXLVVEAPPMPEPEPEFPKDEEEGR*