ggKbase home page

rifoxyb2_full_scaffold_43942_curated_3

Organism: Deltaproteobacteria bacterium RIFOXYB2_FULL_66_7

partial RP 38 / 55 MC: 2 BSCG 36 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1575..2579)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase id=3110354 bin=GWC2_Deltaproteobacteria_66_88 species=Asticcacaulis excentricus genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 316.0
  • Bit_score: 532
  • Evalue 3.10e-148
  • rbh
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 305.0
  • Bit_score: 290
  • Evalue 5.00e-76
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 335.0
  • Bit_score: 639
  • Evalue 3.30e-180

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
GTGCCGGAAGGGCCGCGCGGGACGCACCGGCTGACCGTTCCGGCCGACCGGGCGGGGGAACGCCTCGACCGGTACCTTCCGGAGGCGATCCCGGGAATCTCCCGCGCGCGCGGGCAGCGGTTGATCGAGGAAGGGAACGTCCGCCTGGCGGGAAAGGTCGTGCGACCGTCGACCCGCCTGAAGGGCGGGGAGCCGGTGACCGTCGTCGTCCCTCCGCCCGTCCCTCTCGATTTGACGCCGGAGGATCTCCCCCTCCGCGTTCTGTATGAGGATTCCCACCTCCTGGTCGTCGAAAAACCCGCCGGAATGGTGGTTCACCCCGCACCGGGTCACCCCGGGGGAACGCTCGTGAACGCGCTCCTCGGACGCTCGGACACCCTGTCCGGGATCGGGGGCGTTTCCCGTCCGGGGATCGTCCACCGGCTCGATCGCGACACCTCCGGGGTTCTCGTGGTCGCGAAGACCGACGCCGCCCACGGGACGCTGTCCGCCCGGTTCGCCGCCCACGCGATGGAGCGGAAGTACCACGGGATCGTCTTCGGGTGCCCGCCCGCGGAGAATGGGACCGTGTCGACGCGGATCGGGAGGCACCCCGTCCACCGGAAAAAGATGGCGGTGCTGCCGGCGGGGGGACGGGAGGCCGTCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCTCCCTTCTCGAGTTCCGGTTGGAGACGGGGCGCACCCACCAGGTGCGGGTGCACTGCTCCCACCTCGGCTGTCCGATCGTCGGAGACGACGTGTACGGAAGATCGCGGAAGGTCCCCCTCGGGAAGGGAACGTCCGCACGGACGGTGACCGTCTCCCGCTTTCTCCTGCACGCGTTCCACCTTGCGTTCCCGCATCCGGTTACCGGGGCGCCCCTCTCCTTCACCATCCCCGACCCGCCGGAGTTCGCGGAATTCCGGGCTGCGGTCGGCGAGACCCTCCCGGTCCCACCCCGnnnnnnnnnnnnnnnnnGCCCCGCGCCGTGA
PROTEIN sequence
Length: 335
VPEGPRGTHRLTVPADRAGERLDRYLPEAIPGISRARGQRLIEEGNVRLAGKVVRPSTRLKGGEPVTVVVPPPVPLDLTPEDLPLRVLYEDSHLLVVEKPAGMVVHPAPGHPGGTLVNALLGRSDTLSGIGGVSRPGIVHRLDRDTSGVLVVAKTDAAHGTLSARFAAHAMERKYHGIVFGCPPAENGTVSTRIGRHPVHRKKMAVLPAGGREAVXXXXXXXXXXXXSLLEFRLETGRTHQVRVHCSHLGCPIVGDDVYGRSRKVPLGKGTSARTVTVSRFLLHAFHLAFPHPVTGAPLSFTIPDPPEFAEFRAAVGETLPVPPXXXXXXXPAP*