ggKbase home page

rifoxyb2_full_scaffold_6343_curated_8

Organism: Deltaproteobacteria bacterium RIFOXYB2_FULL_66_7

partial RP 38 / 55 MC: 2 BSCG 36 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(4201..4791)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor id=4963307 bin=GWA2_Deltaproteo_65_63 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 197.0
  • Bit_score: 370
  • Evalue 9.20e-100
  • rbh
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 194.0
  • Bit_score: 232
  • Evalue 1.60e-58
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 197.0
  • Bit_score: 384
  • Evalue 1.10e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGATCACCCTGAACGACGACGGTCAGCCCCGGCTCCGCCTCTCCTCCTACTACCGGCGGCTGCTGACGGGAGACGCCGAGGGGCTCCCGAAGGAGGACCGGGAGTTCCTGAAGCAGAAGGTCAACGCGGCGCTGTGGTTCATCAAGAGCATCGAGCAGCGCAAGCGCACCATCTACAAGGTCGTGGAGAGCATCGTAAAGCTGCAGCGCGACTTTCTCGAGAAGGGGCCCGGCCACCTGCGGCCCCTGACGTTGCGGGACGTCGCCGAGGACATCGAGATGCACGAGTCCACCGTGTCGAGGGTGACCAGCGGCAAGTACGTGAACACCCCCCACGGTATCTTCGAGCTGAAGTACTTCTTCACCTCGGGACTCAACCGCGAGGGGGGGGAGGAGGATATCGCCTCCAAGTCCGTCAAGGAGAAGATCCGGGAGATCATCCACGCCGAGGGGGAGAGCAAGCCGCTCAGCGACCAGGAGCTGATGCGTCTCCTGCGGAACCAGGGGATCCGGATCGCACGGCGGACCGTTACCAAGTACCGCGCGGCAATGGGGCTGCTGGCCTCGTCGCGGCGCAGGAAGCAGTTTTAG
PROTEIN sequence
Length: 197
VITLNDDGQPRLRLSSYYRRLLTGDAEGLPKEDREFLKQKVNAALWFIKSIEQRKRTIYKVVESIVKLQRDFLEKGPGHLRPLTLRDVAEDIEMHESTVSRVTSGKYVNTPHGIFELKYFFTSGLNREGGEEDIASKSVKEKIREIIHAEGESKPLSDQELMRLLRNQGIRIARRTVTKYRAAMGLLASSRRRKQF*