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rifoxya1_full_scaffold_39113_curated_2

Organism: Caulobacterales bacterium RIFOXYA1_FULL_67_7

near complete RP 48 / 55 BSCG 46 / 51 MC: 3 ASCG 5 / 38
Location: comp(120..365)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=2 Tax=Brevundimonas diminuta RepID=L1Q9D6_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 81.0
  • Bit_score: 136
  • Evalue 1.20e-29
RNA chaperone Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 81.0
  • Bit_score: 133
  • Evalue 2.50e-29
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 82.0
  • Bit_score: 136
  • Evalue 1.70e-29

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Taxonomy

RIFOXYA1_FULL_Brevundimonas_67_7_curated → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGTCGCAAGACAAACGTCAGAACCTTCAGGACACCTTCCTCAACTCGGTCCGCAAGACCAAGACGCCGCTGACCATCTTCCTGGTCAATGGGGTCAAGCTGCAGGGTATCGTGACCTGGTTCGACAACTTCTGTGTGCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATCTCCACCATCATGCCGTCCGCGCCCGTGCAACTGTACGAGCCCGACGCCGAAGAAGACTGA
PROTEIN sequence
Length: 82
MSQDKRQNLQDTFLNSVRKTKTPLTIFLVNGVKLQGIVTWFDNFCVXXXXXXXXXXXXXXXISTIMPSAPVQLYEPDAEED*