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rifoxya1_full_scaffold_70015_curated_1

Organism: Caulobacterales bacterium RIFOXYA1_FULL_67_7

near complete RP 48 / 55 BSCG 46 / 51 MC: 3 ASCG 5 / 38
Location: comp(3..116)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Salmonella enterica subsp. enterica serovar Agona str. 557928 RepID=V0EPX7_SALET similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 38.0
  • Bit_score: 82
  • Evalue 9.60e-14
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 38.0
  • Bit_score: 82
  • Evalue 3.00e-14
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=907489 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter actinomycetemcomitans serotype e str. SCC393.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 38.0
  • Bit_score: 82
  • Evalue 1.40e-13

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Taxonomy

Aggregatibacter actinomycetemcomitans → Aggregatibacter → Pasteurellales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 114
ATGAAGGCCGTCGACAAGTTCGAGTACCGCCGCGGCTACAAGTTCTCGACCTACGCCACCTGGTGGATCCGTCAGGCGATCACGCGCTCCATCGCCGACCAGGCGCGGACCATC
PROTEIN sequence
Length: 38
MKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI