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SCNpilot_expt_1000_bf_scaffold_5002_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2..826)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 275.0
  • Bit_score: 340
  • Evalue 2.60e-90
Ribonuclease D n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FNM1_PHAMO similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 275.0
  • Bit_score: 324
  • Evalue 1.10e-85
  • rbh
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 275.0
  • Bit_score: 314
  • Evalue 4.50e-83
  • rbh

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCGGATTATCGAGACCAACGAAGACCTTGCCGGGTTCGTCGCCGAACTGGGCCAGGCGCCCTATCTGGCGCTGGACACCGAATTCCTGCGGGACCAGACCTATTACCCCAAGCTGTGCCTGATCCAGGTCGCGGGCCACCCGCCGGGCGGCGCACCTGTGGAGGGAATCATAGACCCCCTGGGCCAGGGCCTGGACCTGACGCCCTTCTACGAACTGATCGCGCGGCCGGACATCGTCAAGGTGATGCACGCGGCGCGGCAGGATATCGAGATTTTCTTTCTGCAGGGCGGTGTGCTGCCCAATCCGCTGTTCGACACCCAGGTGGCGGCGATGGTCTGCGGCTTCGGCGACGCGGCGTCGTACGAGACGCTGGCGCGCAAGATCGCCAAGGTGGAGATCGACAAGTCGGCCCGCTTCACCGACTGGAGCCACCGGCCCCTGTCCAAGCGGCAACTGGAATACGCCCTGGCCGACGTCACCCATCTGTGCGTGATCTATGAATGGATGGCGGCGCGGCTGGAAAGACCCGGACGCTTTTCCTGGGTCGCCGAGGAAGTGGCCTCGCTGCAGGATCCGGGGCTGTACAAGCTCGACCCCAGCCTGGCCTGGAAGCGGCTGAAGCCGCGCACCAGCAACAAGCGTTTCCTGGCGGTGCTGGCGGCGCTGGCGGCCTGGCGCGAGCAGGAGGCCCAGGCGCGCGACATTCCGCGCGGCCGGGTGGTGAAGGACGAGGCGCTGACCGAGATCGCGGCGCACCCCCCCGAAACGCCGGAGGCGCTGGAGCGCATCCGGGCGGTGCCCAAGGGCTTCGCCAATTCGCGC
PROTEIN sequence
Length: 275
MRIIETNEDLAGFVAELGQAPYLALDTEFLRDQTYYPKLCLIQVAGHPPGGAPVEGIIDPLGQGLDLTPFYELIARPDIVKVMHAARQDIEIFFLQGGVLPNPLFDTQVAAMVCGFGDAASYETLARKIAKVEIDKSARFTDWSHRPLSKRQLEYALADVTHLCVIYEWMAARLERPGRFSWVAEEVASLQDPGLYKLDPSLAWKRLKPRTSNKRFLAVLAALAAWREQEAQARDIPRGRVVKDEALTEIAAHPPETPEALERIRAVPKGFANSR