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SCNpilot_expt_1000_bf_scaffold_2212_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(7475..7726)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036B5510 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 79.0
  • Bit_score: 131
  • Evalue 3.10e-28
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 78.0
  • Bit_score: 130
  • Evalue 9.60e-28
hfq; RNA-binding protein Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 78.0
  • Bit_score: 128
  • Evalue 1.10e-27

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGGGCGAACCCATGAGCGAAAAACAACAGAACCTGCAGGACACCTTCCTCAACGCCGTCCGCAAGAGCAAATCGGCCGTCACCGTCTTCCTGGTCAACGGCGTCAAGCTTCAGGGCAATATCACCTGGTTCGACAATTTCTGTGTGCTGCTGCGCCGCGACGGCCAGTCCCAGCTGGTCTACAAGCACGCCATCTCCACCGTGATGCCGATGGGCCCGATCCAGCTTCAGGACGAACCGGCCGAAATCTAA
PROTEIN sequence
Length: 84
MGEPMSEKQQNLQDTFLNAVRKSKSAVTVFLVNGVKLQGNITWFDNFCVLLRRDGQSQLVYKHAISTVMPMGPIQLQDEPAEI*