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SCNpilot_expt_1000_bf_scaffold_4452_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 6819..7214

Top 3 Functional Annotations

Value Algorithm Source
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 133.0
  • Bit_score: 137
  • Evalue 2.80e-30
Putative transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INR4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 133.0
  • Bit_score: 137
  • Evalue 8.80e-30
Putative transcriptional regulator {ECO:0000313|EMBL:CCA93066.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 133.0
  • Bit_score: 137
  • Evalue 1.20e-29

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Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
GTGGTGTCGGTAGACGCCGTGGCACAACCAACCTTGGCGGGCTGGCTGCTGTTTGCGCGCATGCCGCAGGAACTGGTTGCGAACGCGGTGGTGCGGTTCCGGGCCACGGGTCCGAAACGGTGGATCGGCAGTCGTTTTGGGGACGACGCCGTCGCCAATGCACCGGACGGCAGCGACGTTACCATCGAACAGGATGTCCGCGGCAACCTGTGGGCCCAGCTCAACGGCCTGACCGACCTGCTGGCGCTCAGCAATACCGGCTTTCGGCTGAAGGAAGAGATTTCGCGAACTGCCTACCCCTATGACAGCCTGGCGCTTAAGGAAATTGTCGTGAACGCGTTGGTCCATAGAGACTATACGCGCCCGGAACCCGTGACGATCGATGTCACGCCGGAC
PROTEIN sequence
Length: 132
VVSVDAVAQPTLAGWLLFARMPQELVANAVVRFRATGPKRWIGSRFGDDAVANAPDGSDVTIEQDVRGNLWAQLNGLTDLLALSNTGFRLKEEISRTAYPYDSLALKEIVVNALVHRDYTRPEPVTIDVTPD