ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6638_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(4026..4337)

Top 3 Functional Annotations

Value Algorithm Source
rrf2 family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 105.0
  • Bit_score: 116
  • Evalue 5.20e-24
Transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZBA2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 105.0
  • Bit_score: 116
  • Evalue 1.70e-23
Rrf2 family protein (Putative transcriptional regulator) {ECO:0000313|EMBL:ACJ00412.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 105.0
  • Bit_score: 116
  • Evalue 2.30e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodospirillum centenum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGCAACAACTGGTGCGCGCGGGCATTCTCAAAGGCGTGCGCGGGCCGCGCGGCGGCTACCGGCTGGCGCGGGAACGCCGCCGCATCAGCGTGGGCGATGTGGTGCGGGTGGCCGAAAGCATCGAGGACGACGAGGAAAAGCATGTGCCGCGTTCCGAACTGGGCCAGCGCATCGTCGCGCCCTTTGTCGCCACGCTGCAGGACGAACTGATGACCCGGCTGGACTCGGTCTCCATCGAGGATCTCTGCCAGCGCGCCCGCCATGCGGGCGTGGATGCCGGAATCGACACCAGCGCCGATTTCACAATCTGA
PROTEIN sequence
Length: 104
MQQLVRAGILKGVRGPRGGYRLARERRRISVGDVVRVAESIEDDEEKHVPRSELGQRIVAPFVATLQDELMTRLDSVSIEDLCQRARHAGVDAGIDTSADFTI*