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SCNpilot_expt_1000_bf_scaffold_6638_curated_17

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(12232..13767)

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 500.0
  • Bit_score: 575
  • Evalue 2.00e-161
  • rbh
Ribonuclease R n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AQ64_MARMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 500.0
  • Bit_score: 575
  • Evalue 6.40e-161
  • rbh
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 500.0
  • Bit_score: 575
  • Evalue 9.00e-161

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Taxonomy

Maricaulis maris → Maricaulis → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1536
GTGGATCCGAAAGGCCGCACCGACCTGCGCGCCATTCCCCTGGTGACGATCGATCCGCCCGACGCCCGCGACCATGACGATGCGGTCTGGGCCGGGCCGGATGACGACGACCGCAATCCGGGCGGCCATATCGTGCTGGTCGCCATCGCCGATGTCGCCCATTACGTCACGCCGGGCTCGGCGCTGGACAAGGAAGCCTTCAAGCGCGGCAACAGCGCCTATTTCCCCGACCGGGTGGTGCCGATGCTGCCCGAGGAACTGTCGGCGGACCTCTGCTCGCTGAAGGAAGGCGTGGACCGGCCCTGCCTGGTGGCGCGCATGGTGTTCGACGCGCGTGGCCGCAAGCGCGGCCACACCTTCCTGCGCGCGGTGATGCGCTCGGCGGCGCGGCTGACCTATGCCCAGGCGCAGGCCGCCTTCGACGGCAAGCCGCAAGACGACATGAGCGCCACCGTGCGCCGCACCCTGGCCGATGTCTGGGCCGCCTACCAATCGCTCACCCTGGCGCGCGGCAAGCGCGACCCGCTGGACCTGGACCTGCCGGAGCGCCGCATCATCCTGGGCGCGGACGGCAAGGTGGCCTCCATCGCCTATCGCGAGCGGCTGGACTCCATGAAGCTGATCGAGGAATTCATGGTGCTGGCCAATGTCGCGGCCGCCGAGGCGCTGGAATCCAAGCGCACGCCGCTGATCTATCGCGTGCACGACACCCCTTCCAAGGAAAAGCTGTTCGCCTTTTCGGACTTCCTGCGGACCCTGAACATCAGCTTCGCCAAGGGCCAGGTGGTGCAGCCGGGCGTGTTCAACCGCATCCTGGCGGGCGCGAAAGGATCGCCGCATGAGGCGGTGATGAACGATGTGGTGCTGCGCAGCCAGGCCCAGGCGGTCTATGACCCGGCCAATATCGGGCATTTCGGCCTGAACCTGGACAAGTACGCCCACTTCACCTCGCCCATCCGGCGCTATGCCGACCTGATCGTGCACCGCGCCTTGATCCGCGCCTTCGGGCTGGGCGAAGGCGGCCTGACCGACAAGGAAATCGCGGGGCTGGCCGCCACCGCCGAGCACATCACCATGACCGAGCGCCGCGCCATGGCGGCGGAACGCGATTCCACCGACCGCTATGTCGCCGCTTTCATGGAAGACCGCATCGGCCAGACCTTCGATGCCCGCGTCACCGGCGTCACCCGCTTCGGCCTGTTCGTGCGGCTGGCGGAATCGGGGGCGGAGGGGCTGATCCCGATCCGCAGCCTTTCTTCCGCAAGTGGGGGCACGGACTATTTCCACCATGACGAAAAGCGCCAGGCGCTGGTCGGCCAGCGCGGCGGCCAGGTCTTCGGCATGGGCGATGTGCTGGCGGTGACGCTGCTGGAAGCCGCGCCGCTGACCGGCGGCCTGAGATTCGCCCTGGCGGGCGGCGGCGGCGAGCCACCCCGCCGCACGGGCAAAAGCCGCCCCAAAAGCCATCCGGCTTCCAGGGGCAAAAAGCCCGGAAAGCCGGGCAAGCCGGCCCGGTTCAAGGCCAAAAAACGCTGA
PROTEIN sequence
Length: 512
VDPKGRTDLRAIPLVTIDPPDARDHDDAVWAGPDDDDRNPGGHIVLVAIADVAHYVTPGSALDKEAFKRGNSAYFPDRVVPMLPEELSADLCSLKEGVDRPCLVARMVFDARGRKRGHTFLRAVMRSAARLTYAQAQAAFDGKPQDDMSATVRRTLADVWAAYQSLTLARGKRDPLDLDLPERRIILGADGKVASIAYRERLDSMKLIEEFMVLANVAAAEALESKRTPLIYRVHDTPSKEKLFAFSDFLRTLNISFAKGQVVQPGVFNRILAGAKGSPHEAVMNDVVLRSQAQAVYDPANIGHFGLNLDKYAHFTSPIRRYADLIVHRALIRAFGLGEGGLTDKEIAGLAATAEHITMTERRAMAAERDSTDRYVAAFMEDRIGQTFDARVTGVTRFGLFVRLAESGAEGLIPIRSLSSASGGTDYFHHDEKRQALVGQRGGQVFGMGDVLAVTLLEAAPLTGGLRFALAGGGGEPPRRTGKSRPKSHPASRGKKPGKPGKPARFKAKKR*